RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 C4orf32Q8N8J7 132 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 SPATA3Q8NHX4 192 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 C20orf144Q9BQM9 153 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 VPS25Q9BRG1 176 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 SDR39U1Q9NRG7 319 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 RGS18Q9NS28 235 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 IL17CQ9P0M4 197 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 HCSTQ9UBK5 93 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 PRODH2Q9UF12 536 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 MED19A0JLT2 244 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 CLDN24A6NM45 220 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 FAM166BA8MTA8 275 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 GABRPO00591 440 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 IGF2P01344 180 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 IGFBP3P17936 291 aaPredicted RBP5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 LMO1P25800 156 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 PYCR1P32322 319 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 EMDP50402 254 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR1D5P58170 312 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 RELAQ04206 551 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 GRK1Q15835 563 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 UBE2SQ16763 222 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 FBXW9Q5XUX1 488 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR8G2PQ6IF36 304 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 SLC35F6Q8N357 371 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 C16orf52Q8NHV5 167 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 AENQ8WTP8 325 aaKnown RBP5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 MYLIPQ8WY64 445 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 L3HYPDHQ96EM0 354 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 DUX3Q96PT4 197 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 MLST8Q9BVC4 326 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 CHST5Q9GZS9 411 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 NAT10Q9H0A0 1025 aaKnown RBP5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR1A1Q9P1Q5 309 aa5.31□□□□□ -1.56
TRAPPC11-209ENST00000512476 A0A1B0GTH9 108 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 PP2D1A8MPX8 630 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 KPNA4O00629 521 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 LYPD3O95274 346 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 SLC6A1P30531 599 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 PPOXP50336 477 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 RAB13P51153 203 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 RUNX1Q01196 453 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 ZNF284Q2VY69 593 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 WDR74Q6RFH5 385 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 SLC34A3Q8N130 599 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 TCEANCQ8N8B7 351 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 OTULINQ96BN8 352 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 DCPSQ96C86 337 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 SMIM12Q96EX1 92 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 SIGMAR1Q99720 223 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 ARV1Q9H2C2 271 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 NUDT4Q9NZJ9 180 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 FZD1Q9UP38 647 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 UTP11Q9Y3A2 253 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 ERI3O43414 337 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 NARSO43776 548 aaKnown RBP5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 EDIL3O43854 480 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 CDC40O60508 579 aaKnown RBP eCLIP5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 TACSTD2P09758 323 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 EDNRAP25101 427 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 LOXP28300 417 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 ZNF133P52736 654 aaPredicted RBP5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 PSG4Q00888 419 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 CD164Q04900 197 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 RAB35Q15286 201 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 IL17AQ16552 155 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 DEFB115Q30KQ5 88 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 LINC00114Q6XXX2 140 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 SLC36A1Q7Z2H8 476 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 VKORC1L1Q8N0U8 176 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 MAPKAPK5-AS1Q8N8E1 139 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 TCEAL3Q969E4 200 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 C14orf144Q96I85 54 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 C20orf173Q96LM9 149 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 RBP7Q96R05 134 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 SORT1Q99523 831 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 AIF1LQ9BQI0 150 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 MEGF9Q9H1U4 602 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 DSN1Q9H410 356 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 RALGAPA1Q6GYQ0 2036 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 PAPPA2Q9BXP8 1791 aa5.3□□□□□ -1.56
TRAPPC11-209ENST00000512476 ZG16O60844 167 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 CD8AP01732 235 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 SCGB1A1P11684 91 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 SRP9P49458 86 aaKnown RBP5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 KCNJ11Q14654 390 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 LAGE3Q14657 143 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 POU6F1Q14863 301 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 KCTD16Q68DU8 428 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 HBMQ6B0K9 141 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 ZNF66Q6ZN08 573 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 PRSS41Q7RTY9 318 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 C16orf82Q7Z2V1 217 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 C17orf64Q86WR6 236 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 EID2Q8N6I1 236 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 TEX45Q8NA69 505 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 OR4F15Q8NGB8 312 aa5.29□□□□□ -1.56
TRAPPC11-209ENST00000512476 ASB17Q8WXJ9 295 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms