RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 C11orf53Q8IXP5 236 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 SPERTQ8NA61 448 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 OR1M1Q8NGA1 313 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 OR8B3Q8NGG8 313 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 OR51G2Q8NGK0 314 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 SEH1LQ96EE3 360 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 OR8B2Q96RD0 313 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 C19orf24Q9BVV8 132 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 MROQ9BYG7 248 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 NIPAL2Q9H841 368 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 C14orf119Q9NWQ9 140 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 OR5V1Q9UGF6 321 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 GTF2A1LQ9UNN4 478 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 POLR3KQ9Y2Y1 108 aaPredicted RBP13.76□□□□□ -0.21
DDX41-213ENST00000512027 INSIG2Q9Y5U4 225 aa13.76□□□□□ -0.21
DDX41-213ENST00000512027 PPIAL4CA0A0B4J2A2 164 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 LGALS8O00214 317 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 FSHBP01225 129 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 GATA3P23771 443 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 GNALP38405 381 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 PAX2Q02962 417 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 ROM1Q03395 351 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 ZIK1Q3SY52 487 aaPredicted RBP13.75□□□□□ -0.21
DDX41-213ENST00000512027 ZNF322Q6U7Q0 402 aaPredicted RBP13.75□□□□□ -0.21
DDX41-213ENST00000512027 DCDC5Q6ZRR9 648 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 ZNF679Q8IYX0 411 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 CSNK2A3Q8NEV1 391 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 SPATA3Q8NHX4 192 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 OR51E1Q8TCB6 317 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 LRRC29Q8WV35 223 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 PIGCQ92535 297 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 UBE2FQ969M7 185 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 ITPKCQ96DU7 683 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 FAM71F1Q96KD3 344 aaPredicted RBP13.75□□□□□ -0.21
DDX41-213ENST00000512027 SLC6A7Q99884 636 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 RBM4BQ9BQ04 359 aaKnown RBP13.75□□□□□ -0.21
DDX41-213ENST00000512027 PBOV1Q9GZY1 135 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 RGCCQ9H4X1 137 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 ENOPH1Q9UHY7 261 aa13.75□□□□□ -0.21
DDX41-213ENST00000512027 ANK2Q01484 3957 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 OOEPA6NGQ2 149 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 EBAG9O00559 213 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 SRSF10O75494 262 aaKnown RBP13.74□□□□□ -0.21
DDX41-213ENST00000512027 FCN3O75636 299 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 GYPAP02724 150 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 ALPLP05186 524 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 RIDAP52758 137 aaKnown RBP13.74□□□□□ -0.21
DDX41-213ENST00000512027 GMFBP60983 142 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 KLF17Q5JT82 389 aaPredicted RBP13.74□□□□□ -0.21
DDX41-213ENST00000512027 WDR25Q64LD2 544 aaPredicted RBP13.74□□□□□ -0.21
DDX41-213ENST00000512027 DEGS2Q6QHC5 323 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 WDR82Q6UXN9 313 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 ZNF841Q6ZN19 808 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 COMMD2Q86X83 199 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 FAM90A1Q86YD7 464 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 GID4Q8IVV7 300 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 PLPP7Q8NBV4 271 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 NANPQ8TBE9 248 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 HPSE2Q8WWQ2 592 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 ASB17Q8WXJ9 295 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 RASSF4Q9H2L5 321 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 SMURF1Q9HCE7 757 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 GPR84Q9NQS5 396 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 CLN6Q9NWW5 311 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 CLN8Q9UBY8 286 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 AUP1Q9Y679 476 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 TMEM14AQ9Y6G1 99 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 TENM1Q9UKZ4 2725 aa13.74□□□□□ -0.21
DDX41-213ENST00000512027 IGHV3OR16-10A0A075B7F0 116 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 IGHV2-70DA0A0C4DH43 119 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 A0A1B0GW55 424 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 ZNF670-ZNF695F2Z2N8 137 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 CDIPTO14735 213 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 ADAM20O43506 726 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 FSTL3O95633 263 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 DUX4L2P0CJ85 424 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 DUX4L3P0CJ86 424 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 DUX4L4P0CJ87 422 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 DUX4L5P0CJ88 424 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 DUX4L6P0CJ89 424 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 DUX4L7P0CJ90 424 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 PSMB10P40306 273 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 MZT1Q08AG7 82 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 ARMCX4Q5H9R4 360 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 LIPNQ5VXI9 398 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 DUX4L9Q6RFH8 374 aaPredicted RBP13.73□□□□□ -0.21
DDX41-213ENST00000512027 KCTD8Q6ZWB6 473 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 NLRC3Q7RTR2 1065 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 FGFRL1Q8N441 504 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 SEMA6DQ8NFY4 1073 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 FAM81AQ8TBF8 368 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 RPL3LQ92901 407 aaKnown RBP13.73□□□□□ -0.21
DDX41-213ENST00000512027 EME1Q96AY2 570 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 DACT3Q96B18 629 aaPredicted RBP13.73□□□□□ -0.21
DDX41-213ENST00000512027 TECTBQ96PL2 329 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 DUX4Q9UBX2 424 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 AASSQ9UDR5 926 aa13.73□□□□□ -0.21
DDX41-213ENST00000512027 MRM2Q9UI43 246 aaKnown RBP13.73□□□□□ -0.21
DDX41-213ENST00000512027 ANXA2P2A6NMY6 339 aa13.72□□□□□ -0.21
DDX41-213ENST00000512027 C22orf46C9J442 243 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms