RNA–Protein interactions for RNA: ENST00000510569.5

NUP54-209, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-209ENST00000510569 ZDHHC11BP0C7U3 371 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 HLA-GP17693 338 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 MAGEA5P43359 124 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 OR2B8PP59922 312 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 ZNF85Q03923 595 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 TNFRSF9Q07011 255 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 ST3GAL3Q11203 375 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 ATXN7L3Q14CW9 347 aaPredicted RBP2.91□□□□□ -1.94
NUP54-209ENST00000510569 POU2AF1Q16633 256 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 TPRG1LQ5T0D9 272 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 C1orf220Q5T0J3 134 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 HES5Q5TA89 166 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 OGFRL1Q5TC84 451 aaPredicted RBP2.91□□□□□ -1.94
NUP54-209ENST00000510569 SDHAF4Q5VUM1 108 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 FAHD1Q6P587 224 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 LEG1Q6P5S2 330 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 ENPP6Q6UWR7 440 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 HACD2Q6Y1H2 254 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 C19orf35Q6ZS72 473 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 AHSA2Q719I0 299 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 NIPA1Q7RTP0 329 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 LYG2Q86SG7 212 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 UNC93AQ86WB7 457 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 CALHM1Q8IU99 346 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 CLVS1Q8IUQ0 354 aaPredicted RBP2.91□□□□□ -1.94
NUP54-209ENST00000510569 C2orf73Q8N5S3 287 aaPredicted RBP2.91□□□□□ -1.94
NUP54-209ENST00000510569 TMEM251Q8N6I4 163 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 OR56A4Q8NGH8 313 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 NELFBQ8WX92 580 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 UBE2E3Q969T4 207 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 PPWD1Q96BP3 646 aaKnown RBP2.91□□□□□ -1.94
NUP54-209ENST00000510569 TIMD4Q96H15 378 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 NIPSNAP1Q9BPW8 284 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 DHRS9Q9BPW9 319 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 MICU1Q9BPX6 476 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 KLHDC3Q9BQ90 382 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 ECSITQ9BQ95 431 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 FEM1AQ9BSK4 669 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 CALN1Q9BXU9 219 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 OR51M1Q9H341 326 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 TRABDQ9H4I3 376 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 SLC17A5Q9NRA2 495 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 DDX19AQ9NUU7 478 aaKnown RBP2.91□□□□□ -1.94
NUP54-209ENST00000510569 GHRLQ9UBU3 117 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 ENOPH1Q9UHY7 261 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 GUCA1BQ9UMX6 200 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 FKBP7Q9Y680 259 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 TNS2Q63HR2 1409 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 NHSQ6T4R5 1651 aa2.91□□□□□ -1.94
NUP54-209ENST00000510569 TOGARAM1Q9Y4F4 1720 aa2.9□□□□□ -1.94
NUP54-209ENST00000510569 PALLDQ8WX93 1383 aa2.9□□□□□ -1.94
NUP54-209ENST00000510569 KCPQ6ZWJ8 1503 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 UQCRHLA0A096LP55 91 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 A0A1B0GUS0 222 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 A0A1B0GVI7 797 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 A6NIZ1 184 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 SYCE1LA8MT33 242 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 HIDE1A8MVS5 230 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 M0QZ92 97 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 SULT1C2O00338 296 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 PLPP3O14495 311 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 PSTPIP1O43586 416 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 TYROBPO43914 113 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 NOS1APO75052 506 aaPredicted RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 SRP72O76094 671 aaKnown RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 PLEKHA8P1O95397 391 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 UTS2O95399 124 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 ORM1P02763 201 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 UQCRHP07919 91 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 CCDC166P0CW27 439 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 ANXA3P12429 323 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 UCHL3P15374 230 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 RBM34P42696 430 aaKnown RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 MAGEA12P43365 314 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 OMPP47874 163 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 PPOXP50336 477 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 IDH3GP51553 393 aaPredicted RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 UGT2B15P54855 530 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 UBE2KP61086 200 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 AP1S1P61966 158 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 MRPS22P82650 360 aaKnown RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 VLDLRP98155 873 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 OC90Q02509 493 aaPredicted RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 ZP4Q12836 540 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 SRSF6Q13247 344 aaKnown RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 AQP6Q13520 282 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 TPBGQ13641 420 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 PTGES3Q15185 160 aaKnown RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 SLC9A3R2Q15599 337 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 RPEL1Q2QD12 228 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 TMEM176BQ3YBM2 270 aaPredicted RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 PDZD11Q5EBL8 140 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 SPIN3Q5JUX0 258 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 RBM48Q5RL73 367 aaKnown RBP2.9□□□□□ -1.95
NUP54-209ENST00000510569 TIMM23BQ5SRD1 257 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 CCNJQ5T5M9 372 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 HACD4Q5VWC8 232 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 MEDAGQ5VYS4 303 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 LPCAT4Q643R3 524 aa2.9□□□□□ -1.95
NUP54-209ENST00000510569 SPESP1Q6UW49 350 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 120 ms