RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 C7orf66A4D0T2 115 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 OR4C46A6NHA9 309 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 PPP6CO00743 305 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 OR7C1O76099 320 aaPredicted RBP3.24□□□□□ -1.89
USP53-205ENST00000509769 SOD2P04179 222 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 ESDP10768 282 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 IRF1P10914 325 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 ERGP11308 486 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 GPX3P22352 226 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 NMBRP28336 390 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 RPS18P62269 152 aaKnown RBP3.24□□□□□ -1.89
USP53-205ENST00000509769 GRB7Q14451 532 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 SNAI3Q3KNW1 292 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 ZNF628Q5EBL2 1059 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 TMEM88Q6PEY1 159 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 ZNF765Q7L2R6 523 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 ZNF761Q86XN6 746 aaPredicted RBP3.24□□□□□ -1.89
USP53-205ENST00000509769 CILP2Q8IUL8 1156 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 IL17REQ8NFR9 667 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 OR11L1Q8NGX0 322 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 VSTM2AQ8TAG5 236 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 TMEM37Q8WXS4 190 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 SIGLEC10Q96LC7 697 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 PRELID3AQ96N28 172 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 LINC00052Q96N35 136 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 RSPO3Q9BXY4 272 aaPredicted RBP3.24□□□□□ -1.89
USP53-205ENST00000509769 ATG10Q9H0Y0 220 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 DYNLRB1Q9NP97 96 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 SLC6A13Q9NSD5 602 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 MTFP1Q9UDX5 166 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 ZNF391Q9UJN7 358 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 HSF4Q9ULV5 492 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 ZNF257Q9Y2Q1 563 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.24□□□□□ -1.89
USP53-205ENST00000509769 TBC1D3DA0A087WVF3 549 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 TBC1D3IA0A087WXS9 549 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 GRXCR1A8MXD5 290 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 TBC1D3LB9A6J9 549 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 UBE2CO00762 179 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 HSPB6O14558 160 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 TNFRSF10CO14798 259 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 NDUFS4O43181 175 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 EIF3GO75821 320 aaKnown RBP eCLIP3.24□□□□□ -1.89
USP53-205ENST00000509769 PLAUP00749 431 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 APCSP02743 223 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 MELTFP08582 738 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 CD1DP15813 335 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 HLA-GP17693 338 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 HOXA5P20719 270 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 FUT4P22083 530 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 FDXRP22570 491 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 DCTDP32321 178 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 PTGER4P35408 488 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 PIGAP37287 484 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 LIMS1P48059 325 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 PPP1CAP62136 330 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 RPS15AP62244 130 aaKnown RBP3.24□□□□□ -1.89
USP53-205ENST00000509769 PRDX1Q06830 199 aaKnown RBP3.24□□□□□ -1.89
USP53-205ENST00000509769 LAMTOR4Q0VGL1 99 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 PTPRCAPQ14761 206 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 MICBQ29980 383 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 TP53I3Q53FA7 332 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 TMEM201Q5SNT2 666 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 DMRTA1Q5VZB9 504 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 TBC1D3CQ6IPX1 549 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 PLBD1Q6P4A8 553 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 PLXDC2Q6UX71 529 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 SLC16A12Q6ZSM3 486 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 PLPPR4Q7Z2D5 763 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 CAMKMTQ7Z624 323 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 ZC3H3Q8IXZ2 948 aaKnown RBP3.24□□□□□ -1.89
USP53-205ENST00000509769 TBC1D3Q8IZP1 549 aaPredicted RBP3.24□□□□□ -1.89
USP53-205ENST00000509769 LRRC25Q8N386 305 aaPredicted RBP3.24□□□□□ -1.89
USP53-205ENST00000509769 ZNF611Q8N823 705 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 OR9G4Q8NGQ1 327 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 OR9A1PQ8NGU1 263 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 SVIPQ8NHG7 77 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 ZCCHC10Q8TBK6 192 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 GALMQ96C23 342 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 ADAT3Q96EY9 351 aaPredicted RBP3.24□□□□□ -1.89
USP53-205ENST00000509769 POM121Q96HA1 1249 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 FUBP3Q96I24 572 aaKnown RBP eCLIP3.24□□□□□ -1.89
USP53-205ENST00000509769 ST6GAL2Q96JF0 529 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 MSLNLQ96KJ4 702 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 MBOAT4Q96T53 435 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 HSPB9Q9BQS6 159 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 PARLQ9H300 379 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 RHBGQ9H310 441 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 FKRPQ9H9S5 495 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 NGBQ9NPG2 151 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 INIPQ9NRY2 104 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 SLC7A10Q9NS82 523 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 ELOVL5Q9NYP7 299 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 NDRG4Q9ULP0 352 aaKnown RBP3.24□□□□□ -1.89
USP53-205ENST00000509769 TLCD2A6NGC4 264 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 PRAMEF26H0Y7S4 382 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 RER1O15258 196 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 PRAMEF11O60813 436 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 DHRS3O75911 302 aa3.24□□□□□ -1.89
USP53-205ENST00000509769 RECQL4O94761 1208 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms