RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 JAM3Q9BX67 310 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 OCEL1Q9H607 264 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 TMEM100Q9NV29 134 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 ERVK13-1Q9NX77 482 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 H2AFY2Q9P0M6 372 aaPredicted RBP7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 IL19Q9UHD0 177 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 PSORS1C1Q9UIG5 152 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 PPP1R3CQ9UQK1 317 aa7.38□□□□□ -1.23
PDLIM5-213ENST00000509357 A0A0G2JMP0 313 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 IGHV3-64DA0A0J9YX35 117 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 A0A0X1KG70 313 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 IQCF6A8MYZ5 107 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 ZNF670-ZNF695F2Z2N8 137 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 PLPP2O43688 288 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 RPP14O95059 124 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 HLA-DPB1P04440 258 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 ANXA2P07355 339 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 PMELP40967 661 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 SRP9P49458 86 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 GTF2A1P52655 376 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 EGR3Q06889 387 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 SCGB2A2Q13296 93 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 GALEQ14376 348 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 ASPHD2Q6ICH7 369 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 Q6ZSR3 168 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 PGAP1Q75T13 922 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 MRPL21Q7Z2W9 205 aaKnown RBP7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 RNF144BQ7Z419 303 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 KRT77Q7Z794 578 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 RDH10Q8IZV5 341 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 KLHL36Q8N4N3 616 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 BPIFB6Q8NFQ5 453 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 OR4M2Q8NGB6 313 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 OR10AD1Q8NGE0 317 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 OR56B2PQ8NGI1 322 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 RPS4Y2Q8TD47 263 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 RGP1Q92546 391 aaPredicted RBP7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 RFKQ969G6 155 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 C4orf36Q96KX1 117 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 ALG8Q9BVK2 526 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 PBOV1Q9GZY1 135 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 PLCXD1Q9NUJ7 323 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 TMEM106BQ9NUM4 274 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 FRRS1LQ9P0K9 344 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 METRNQ9UJH8 293 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 IKZF2Q9UKS7 526 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 NPTNQ9Y639 398 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 R4GMQ9 66 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 HSPE1-MOB4S4R3N1 261 aa7.37□□□□□ -1.23
PDLIM5-213ENST00000509357 TMEM269A0A1B0GVZ9 245 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 GGT3PA6NGU5 568 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 A6NIN4 97 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 METTL15A6NJ78 407 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 LRRC30A6NM36 301 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 CD300LBA8K4G0 201 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 F5H5P2 479 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 TBX1O43435 398 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 MPZL2O60487 215 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 IGHV2-5P01817 119 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 IRF2P14316 349 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 HSD11B1P28845 292 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 DCTDP32321 178 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 MMP16P51512 607 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 BTG1P62324 171 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 SLC35A2P78381 396 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 LCN2P80188 198 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 RAB40BQ12829 278 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 POU4F2Q12837 409 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 MAB21L1Q13394 359 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 IRF3Q14653 427 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 OR8B8Q15620 311 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 ODF4Q2M2E3 257 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 DCAF12L2Q5VW00 463 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 CRIP3Q6Q6R5 217 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 DEGS2Q6QHC5 323 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 AHSA2Q719I0 299 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 MOGAT3Q86VF5 341 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 SPICQ8N5J4 248 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 TEX29Q8N6K0 151 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 ACBD7Q8N6N7 88 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 PLPP7Q8NBV4 271 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 OR51A4Q8NGJ6 313 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 OR51E1Q8TCB6 317 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 HPSE2Q8WWQ2 592 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 ASB17Q8WXJ9 295 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 REEP6Q96HR9 211 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 CNBD2Q96M20 576 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 ZNF184Q99676 751 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 SLC30A2Q9BRI3 323 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 METTL17Q9H7H0 456 aaPredicted RBP7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 ERVK-18Q9QC07 812 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 NUFIP1Q9UHK0 495 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 OR52A1Q9UKL2 312 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 DIMT1Q9UNQ2 313 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 LSM2Q9Y333 95 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 RPL36Q9Y3U8 105 aaKnown RBP7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 COL6A5A8TX70 2615 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 MALRD1Q5VYJ5 2156 aa7.36□□□□□ -1.23
PDLIM5-213ENST00000509357 DAPL1A0PJW8 107 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms