RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 USF1P22415 310 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 GCH1P30793 250 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 CD200P41217 278 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 GUCA1AP43080 201 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 CRYBB2P43320 205 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 ARHGDIAP52565 204 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 TPTEP56180 551 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 DSCR9P59020 149 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 CXCR4P61073 352 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 SNRPGP62308 76 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 GRB2P62993 217 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 CSNK2BP67870 215 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 ADARB1P78563 741 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 MRPS11P82912 194 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 TNFAIP6P98066 277 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 MVKQ03426 396 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 ZMYND11Q15326 602 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 LRRC36Q1X8D7 754 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 GFOD2Q3B7J2 385 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 PCGF3Q3KNV8 242 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 DMRTC1Q5HYR2 192 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 LCN1P1Q5VSP4 162 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 Q6ZSR3 168 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 MOGAT3Q86VF5 341 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 C11orf53Q8IXP5 236 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 Q8N1Y9 231 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 PRSS35Q8N3Z0 413 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 FGFRL1Q8N441 504 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 MFSD4AQ8N468 514 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 GALNT4Q8N4A0 578 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 C19orf18Q8NEA5 215 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 OR2Z1Q8NG97 314 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 OR8J1Q8NGP2 316 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 SNX33Q8WV41 574 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 SPTSSAQ969W0 71 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 DACT3Q96B18 629 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 LGALS12Q96DT0 336 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 REEP6Q96HR9 211 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 PLEKHA8Q96JA3 519 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 ADAT1Q9BUB4 502 aaKnown RBP6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 CDADC1Q9BWV3 514 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 YIPF3Q9GZM5 350 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 GCM1Q9NP62 436 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 MYOZ1Q9NP98 299 aaPredicted RBP6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 FAM118AQ9NWS6 357 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 CLN6Q9NWW5 311 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 SLC22A13Q9Y226 551 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 MYRFQ9Y2G1 1151 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 RHBDD3Q9Y3P4 386 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 N6AMT1Q9Y5N5 214 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 ARHGAP32A7KAX9 2087 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 DYSFO75923 2080 aa6.05□□□□□ -1.44
TOPBP1-207ENST00000509162 FAM20BO75063 409 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 BAG2O95816 211 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 IGHV2-5P01817 119 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 H2BFMP0C1H6 154 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 AMY2BP19961 511 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 CA6P23280 308 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 CD80P33681 288 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 ADMP35318 185 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 THBS2P35442 1172 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 PSMB10P40306 273 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 SLC15A1P46059 708 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 GPR6P46095 362 aaPredicted RBP6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 BLVRAP53004 296 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 CDH15P55291 814 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 NANOS3P60323 173 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 TP53I3Q53FA7 332 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 WDR38Q5JTN6 314 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 SLC25A30Q5SVS4 291 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF691Q5VV52 312 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 XAF1Q6GPH4 301 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 ASPHD2Q6ICH7 369 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 CRIP3Q6Q6R5 217 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF322Q6U7Q0 402 aaPredicted RBP6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 ZNF826PQ6ZT77 177 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 PGAP1Q75T13 922 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 KRT74Q7RTS7 529 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 MRPL21Q7Z2W9 205 aaKnown RBP6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 RNF144BQ7Z419 303 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 GID4Q8IVV7 300 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 OR10AC1Q8NH08 325 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 SVIPQ8NHG7 77 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 RHOXF1Q8NHV9 184 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 CNIH3Q8TBE1 160 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 THEM6Q8WUY1 208 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 RGP1Q92546 391 aaPredicted RBP6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 SGCDQ92629 289 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 RORBQ92753 470 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 SEH1LQ96EE3 360 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 RNFT2Q96EX2 444 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 C9orf16Q9BUW7 83 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 PBOV1Q9GZY1 135 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 MS4A5Q9H3V2 200 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 METTL17Q9H7H0 456 aaPredicted RBP6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 AMBNQ9NP70 447 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 TMEM106BQ9NUM4 274 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 SMPD3Q9NY59 655 aaPredicted RBP6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 CTSZQ9UBR2 303 aa6.04□□□□□ -1.44
TOPBP1-207ENST00000509162 NUFIP1Q9UHK0 495 aaKnown RBP6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms