RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 PLCXD1Q9NUJ7 323 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 ACOXLQ9NUZ1 547 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 ERVK13-1Q9NX77 482 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 AASSQ9UDR5 926 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 ENPP5Q9UJA9 477 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 BLOC1S6Q9UL45 172 aa7.76□□□□□ -1.17
NUP54-207ENST00000508583 DIMT1Q9UNQ2 313 aaKnown RBP7.76□□□□□ -1.17
NUP54-207ENST00000508583 CAB39Q9Y376 341 aaPredicted RBP7.76□□□□□ -1.17
NUP54-207ENST00000508583 F8P00451 2351 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 IGHV4-30-2A0A087WSY4 118 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 TRIM64A6NGJ6 449 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 TRIM64BA6NI03 449 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 TMEM210A6NLX4 147 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 TMEM212A6NML5 194 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 PRR32B1ATL7 298 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 MYL12BO14950 172 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 CDC14BO60729 498 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 SRSF10O75494 262 aaKnown RBP7.75□□□□□ -1.17
NUP54-207ENST00000508583 SERPINA3P01011 423 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 TTRP02766 147 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 ISG15P05161 165 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 INHBBP09529 407 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 MYF6P23409 242 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 TGM4P49221 684 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 TAS2R43P59537 309 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 LOXL1Q08397 574 aaPredicted RBP7.75□□□□□ -1.17
NUP54-207ENST00000508583 MFGE8Q08431 387 aaPredicted RBP7.75□□□□□ -1.17
NUP54-207ENST00000508583 RIN1Q13671 783 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 KCNJ8Q15842 424 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 SMN1Q16637 294 aaKnown RBP7.75□□□□□ -1.17
NUP54-207ENST00000508583 CCDC58Q4VC31 144 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 DMRTA1Q5VZB9 504 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 LHFPL3Q86UP9 236 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 CATSPERDQ86XM0 798 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 ZDHHC23Q8IYP9 409 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 BPIFB6Q8NFQ5 453 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 OR2G2Q8NGZ5 317 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 ITLN1Q8WWA0 313 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 GTF3AQ92664 365 aaKnown RBP7.75□□□□□ -1.17
NUP54-207ENST00000508583 RAB39BQ96DA2 213 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 FAM71F1Q96KD3 344 aaPredicted RBP7.75□□□□□ -1.17
NUP54-207ENST00000508583 ZNF184Q99676 751 aaPredicted RBP7.75□□□□□ -1.17
NUP54-207ENST00000508583 NEK6Q9HC98 313 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 TRIM36Q9NQ86 728 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 G6PC2Q9NQR9 355 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 ZNF275Q9NSD4 429 aaPredicted RBP7.75□□□□□ -1.17
NUP54-207ENST00000508583 ZNF319Q9P2F9 582 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 PSORS1C1Q9UIG5 152 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 SLC22A13Q9Y226 551 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 MYRFQ9Y2G1 1151 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 TPRKBQ9Y3C4 175 aa7.75□□□□□ -1.17
NUP54-207ENST00000508583 OR5B21A6NL26 309 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 VWC2LB2RUY7 222 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 RNF223E7ERA6 249 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 F5H5P2 479 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 MLNRO43193 412 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 RP2O75695 350 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 GATBO75879 557 aaKnown RBP7.74□□□□□ -1.17
NUP54-207ENST00000508583 FSTL3O95633 263 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 PNPP00491 289 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 IGLV3-1P01715 115 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 HLA-DPB1P04440 258 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 CCL1P22362 96 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 CPT2P23786 658 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 OR12D2P58182 307 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 ST3GAL4Q11206 333 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 ALKBH1Q13686 389 aaKnown RBP7.74□□□□□ -1.17
NUP54-207ENST00000508583 WDR38Q5JTN6 314 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 C6orf141Q5SZD1 244 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 AHSA2Q719I0 299 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 KRT74Q7RTS7 529 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 MUC20Q8N307 709 aaPredicted RBP7.74□□□□□ -1.17
NUP54-207ENST00000508583 SPICQ8N5J4 248 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 ZNF676Q8N7Q3 588 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 OR52N1Q8NH53 320 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 PP6455Q8WZ26 134 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 PIGCQ92535 297 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 PELI1Q96FA3 418 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 LYZL4Q96KX0 146 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 GCM1Q9NP62 436 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 TMEM106BQ9NUM4 274 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 HHLA2Q9UM44 414 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 ERGIC3Q9Y282 383 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 PIGLQ9Y2B2 252 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 MED13LQ71F56 2210 aa7.74□□□□□ -1.17
NUP54-207ENST00000508583 TANC2Q9HCD6 1990 aa7.73□□□□□ -1.17
NUP54-207ENST00000508583 FLNAP21333 2647 aaKnown RBP7.73□□□□□ -1.17
NUP54-207ENST00000508583 C5orf63A6NC05 138 aa7.73□□□□□ -1.17
NUP54-207ENST00000508583 A6NLC8 198 aa7.73□□□□□ -1.17
NUP54-207ENST00000508583 SLC1A7O00341 560 aa7.73□□□□□ -1.17
NUP54-207ENST00000508583 P2RY10O00398 339 aa7.73□□□□□ -1.17
NUP54-207ENST00000508583 MAGEB4O15481 346 aaPredicted RBP7.73□□□□□ -1.17
NUP54-207ENST00000508583 LILRA1O75019 489 aa7.73□□□□□ -1.17
NUP54-207ENST00000508583 PTBP3O95758 552 aaKnown RBP7.73□□□□□ -1.17
NUP54-207ENST00000508583 NRASP01111 189 aa7.73□□□□□ -1.17
NUP54-207ENST00000508583 OCM2P0CE71 109 aa7.73□□□□□ -1.17
NUP54-207ENST00000508583 OCMP0CE72 109 aaPredicted RBP7.73□□□□□ -1.17
NUP54-207ENST00000508583 ZNF20P17024 532 aa7.73□□□□□ -1.17
NUP54-207ENST00000508583 COL8A2P25067 703 aa7.73□□□□□ -1.17
NUP54-207ENST00000508583 ACKR3P25106 362 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms