RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 CHCHD6Q9BRQ6 235 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 TSSK6Q9BXA6 273 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 CADM1Q9BY67 442 aaKnown RBP3.84□□□□□ -1.79
NUP54-206ENST00000508465 PLA2G12AQ9BZM1 189 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 NDEL1Q9GZM8 345 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 MS4A7Q9GZW8 240 aaPredicted RBP3.84□□□□□ -1.79
NUP54-206ENST00000508465 WDR76Q9H967 626 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 RPRD1BQ9NQG5 326 aaKnown RBP3.84□□□□□ -1.79
NUP54-206ENST00000508465 ARMC1Q9NVT9 282 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 STX18Q9P2W9 335 aaKnown RBP3.84□□□□□ -1.79
NUP54-206ENST00000508465 AASSQ9UDR5 926 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 SLC7A8Q9UHI5 535 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 FBXL3Q9UKT7 428 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 PRPF19Q9UMS4 504 aaKnown RBP3.84□□□□□ -1.79
NUP54-206ENST00000508465 SAMHD1Q9Y3Z3 626 aaKnown RBP3.84□□□□□ -1.79
NUP54-206ENST00000508465 N6AMT1Q9Y5N5 214 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 FKBP7Q9Y680 259 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 LHFPL6Q9Y693 200 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 CACNG2Q9Y698 323 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 FN1P02751 2386 aaKnown RBP3.84□□□□□ -1.79
NUP54-206ENST00000508465 C2CD3Q4AC94 2353 aa3.84□□□□□ -1.79
NUP54-206ENST00000508465 CR1P17927 2039 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 SVEP1Q4LDE5 3571 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 ABCA1O95477 2261 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 NAV3Q8IVL0 2385 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 DHRS12A0PJE2 317 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 C5orf63A6NC05 138 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 OR6C6A6NF89 314 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 FAM183AA6NL82 134 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 A8MV72 311 aaPredicted RBP3.83□□□□□ -1.8
NUP54-206ENST00000508465 F5H5K5 113 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 GNGT2O14610 69 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 PPIHO43447 177 aaKnown RBP3.83□□□□□ -1.8
NUP54-206ENST00000508465 IDH3BO43837 385 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 CD5LO43866 347 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 TIMM8AO60220 97 aaPredicted RBP3.83□□□□□ -1.8
NUP54-206ENST00000508465 DOK2O60496 412 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 TIPRLO75663 272 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 ACTL6BO94805 426 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 INMTO95050 263 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 SNAP29O95721 258 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 CST1P01037 141 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 TGFAP01135 160 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 IGHV3-13P01766 116 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 ERCC1P07992 297 aaPredicted RBP3.83□□□□□ -1.8
NUP54-206ENST00000508465 CLUP10909 449 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 PSKH1P11801 424 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 NR2C1P13056 603 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 SLC25A16P16260 332 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 GCH1P30793 250 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 MAGEA2P43356 314 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 RPS23P62266 143 aaKnown RBP3.83□□□□□ -1.8
NUP54-206ENST00000508465 LOXL1Q08397 574 aaPredicted RBP3.83□□□□□ -1.8
NUP54-206ENST00000508465 TRAP1Q12931 704 aaKnown RBP3.83□□□□□ -1.8
NUP54-206ENST00000508465 BNIP1Q12981 228 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 AVPI1Q5T686 147 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 TMEM236Q5W0B7 351 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 ACSM5Q6NUN0 579 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 C16orf54Q6UWD8 224 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 ZNF620Q6ZNG0 422 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 CFAP77Q6ZQR2 320 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 RASSF6Q6ZTQ3 369 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 ADCK1Q86TW2 530 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 CPOQ8IVL8 374 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 OR5AS1Q8N127 324 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 ARHGAP24Q8N264 748 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 ZNF786Q8N393 782 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 SLC37A3Q8NCC5 494 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 PROKR2Q8NFJ6 384 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 SLC26A10Q8NG04 563 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 OR1F12Q8NHA8 337 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 FNDC8Q8TC99 324 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 GIPC3Q8TF64 312 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 MSI2Q96DH6 328 aaKnown RBP3.83□□□□□ -1.8
NUP54-206ENST00000508465 ASB9Q96DX5 294 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 COG8Q96MW5 612 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 GPX7Q96SL4 187 aaPredicted RBP3.83□□□□□ -1.8
NUP54-206ENST00000508465 DDOQ99489 341 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 PITX2Q99697 317 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 NIPSNAP1Q9BPW8 284 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 PIMREGQ9BSJ6 248 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 BCL2L14Q9BZR8 327 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 TRIM15Q9C019 465 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 BPESC1Q9GZL8 116 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 C1orf21Q9H246 121 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 C1orf198Q9H425 327 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 MAGIXQ9H6Y5 334 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 REEP1Q9H902 201 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 LPAR2Q9HBW0 351 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 KRCC1Q9NPI7 259 aaPredicted RBP3.83□□□□□ -1.8
NUP54-206ENST00000508465 MRPL22Q9NWU5 206 aaKnown RBP3.83□□□□□ -1.8
NUP54-206ENST00000508465 PLEK2Q9NYT0 353 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 PTTG3PQ9NZH4 202 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 PDP1Q9P0J1 537 aaPredicted RBP3.83□□□□□ -1.8
NUP54-206ENST00000508465 POMPQ9Y244 141 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 POLR1DQ9Y2S0 133 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 CDH10Q9Y6N8 788 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 SONP18583 2426 aaKnown RBP3.83□□□□□ -1.8
NUP54-206ENST00000508465 JMJD1CQ15652 2540 aa3.83□□□□□ -1.8
NUP54-206ENST00000508465 NSD1Q96L73 2696 aaPredicted RBP3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms