RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 DUX4Q9UBX2 424 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 RHBDD3Q9Y3P4 386 aa11.86□□□□□ -0.51
RAB28-205ENST00000508274 TRAV38-1A0A0B4J264 116 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 PRODHO43272 600 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 ENSAO43768 121 aaKnown RBP11.85□□□□□ -0.51
RAB28-205ENST00000508274 TIPRLO75663 272 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 LHBP01229 141 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 APOC1P02654 83 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 HMGN1P05114 100 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 SFTPBP07988 381 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 ACKR3P25106 362 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 RPS7P62081 194 aaKnown RBP11.85□□□□□ -0.51
RAB28-205ENST00000508274 BAMBIQ13145 260 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 C3orf56Q8N813 242 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 OR1M1Q8NGA1 313 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 LRRC29Q8WV35 223 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 SEH1LQ96EE3 360 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 LYZL4Q96KX0 146 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 CADM1Q9BY67 442 aaKnown RBP11.85□□□□□ -0.51
RAB28-205ENST00000508274 YY1AP1Q9H869 796 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 SLC25A19Q9HC21 320 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 TVP23BQ9NYZ1 205 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 ERVK-18Q9QC07 812 aa11.85□□□□□ -0.51
RAB28-205ENST00000508274 PSMD9O00233 223 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 MRPL3P09001 348 aaKnown RBP11.84□□□□□ -0.51
RAB28-205ENST00000508274 HOXB6P17509 224 aaKnown RBP11.84□□□□□ -0.51
RAB28-205ENST00000508274 NPY4RP50391 375 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 PSMA6P60900 246 aaKnown RBP11.84□□□□□ -0.51
RAB28-205ENST00000508274 MZT1Q08AG7 82 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 APOFQ13790 326 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 KCNJ8Q15842 424 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 RUSC1-AS1Q66K80 236 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 C9orf139Q6ZV77 190 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.84□□□□□ -0.51
RAB28-205ENST00000508274 OR8B12Q8NGG6 310 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 ITPKCQ96DU7 683 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 PCGF1Q9BSM1 259 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 FGF23Q9GZV9 251 aaPredicted RBP11.84□□□□□ -0.51
RAB28-205ENST00000508274 SP140LQ9H930 580 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 KIF17Q9P2E2 1029 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 LRP12Q9Y561 859 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 CCDC182A6NF36 153 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.84□□□□□ -0.51
RAB28-205ENST00000508274 M0R129 80 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 CFL1P23528 166 aaKnown RBP11.84□□□□□ -0.51
RAB28-205ENST00000508274 DAPP51397 102 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 SLC9A3R2Q15599 337 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 SLC35D3Q5M8T2 416 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 TEX36Q5VZQ5 186 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 WDR82Q6UXN9 313 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 TTTY10Q9BZA0 68 aa11.84□□□□□ -0.51
RAB28-205ENST00000508274 PAPOLBQ9NRJ5 636 aaKnown RBP11.84□□□□□ -0.51
RAB28-205ENST00000508274 ZNF850A8MQ14 1090 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 PRR32B1ATL7 298 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 DVL1O14640 695 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 CDIPTO14735 213 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 TMPRSS2O15393 492 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 GSC2O15499 205 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 HKR1P10072 659 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 MMP9P14780 707 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 ALOX5APP20292 161 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 CFHR2P36980 270 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 GNALP38405 381 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 CRISP1P54107 249 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 GMFBP60983 142 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 PRDX4Q13162 271 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 SNAPC1Q16533 368 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 DEFB112Q30KQ8 113 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 FAHD1Q6P587 224 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 BCDIN3DQ7Z5W3 292 aaKnown RBP11.83□□□□□ -0.52
RAB28-205ENST00000508274 KRT77Q7Z794 578 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 CSNK2A3Q8NEV1 391 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 UTP4Q969X6 686 aaKnown RBP11.83□□□□□ -0.52
RAB28-205ENST00000508274 TBX15Q96SF7 602 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 RGCCQ9H4X1 137 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 RNPEPL1Q9HAU8 725 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 TRIM36Q9NQ86 728 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 LAMP5Q9UJQ1 280 aa11.83□□□□□ -0.52
RAB28-205ENST00000508274 NDUFA2O43678 99 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 PRKYO43930 277 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 MITFO75030 526 aaPredicted RBP11.82□□□□□ -0.52
RAB28-205ENST00000508274 RNASE1P07998 156 aaKnown RBP11.82□□□□□ -0.52
RAB28-205ENST00000508274 MTNR1AP48039 350 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 BNIP1Q12981 228 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 PTGES3Q15185 160 aaKnown RBP11.82□□□□□ -0.52
RAB28-205ENST00000508274 WDR38Q5JTN6 314 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 GPR157Q5UAW9 335 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 BTN2A1Q7KYR7 527 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 FAM216BQ8N7L0 139 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 HPSE2Q8WWQ2 592 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 ST8SIA4Q92187 359 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 RPL3LQ92901 407 aaKnown RBP11.82□□□□□ -0.52
RAB28-205ENST00000508274 TEAD3Q99594 435 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 CCL13Q99616 98 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 PKP2Q99959 881 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 TLNRD1Q9H1K6 362 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 COPS3Q9UNS2 423 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 PCDHGB1Q9Y5G3 927 aa11.82□□□□□ -0.52
RAB28-205ENST00000508274 ZNF879B4DU55 563 aa11.81□□□□□ -0.52
RAB28-205ENST00000508274 TOX4O94842 621 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms