RNA–Protein interactions for RNA: ENST00000507901.5

DDR1-261, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 4

Gene DDR1, Length 562 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-261	ENST00000507901	LRP5L	A4QPB2	252 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	CLDN25	C9JDP6	229 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	TPD52L2	O43399	206 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	PPIH	O43447	177 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	CD5L	O43866	347 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	RPP14	O95059	124 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	FSTL3	O95633	263 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	FADS2	O95864	444 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	IGHV2-70	P01814	119 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	LIMS3	P0CW19	117 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	LIMS4	P0CW20	117 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	KIR3DL2	P43630	455 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	OR12D2	P58182	307 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	LMO4	P61968	165 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	OR8G1	Q15617	311 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	WDR38	Q5JTN6	314 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	BCL2L15	Q5TBC7	163 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	ZBTB37	Q5TC79	503 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	C8orf59	Q8N0T1	100 aa	Predicted RBP	13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	SYS1	Q8N2H4	156 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	CLDND2	Q8NHS1	167 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	CCL17	Q92583	94 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	ERGIC1	Q969X5	290 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	PELI1	Q96FA3	418 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	PPP1R3C	Q9UQK1	317 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901		V9GYS6	101 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	SON	P18583	2426 aa	Known RBP	13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	HIVEP2	P31629	2446 aa		13.79	□□□□□ -0.2
DDR1-261	ENST00000507901	DHRS7C	A6NNS2	312 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	ANKRD30BL	A7E2S9	258 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	TMEM178B	H3BS89	294 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	IFNL4	K9M1U5	179 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	DHRS3	O75911	302 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	CHN2	P52757	468 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	NANOS3	P60323	173 aa	Known RBP	13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	SLC3A1	Q07837	685 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	MPPED2	Q15777	294 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	SNCB	Q16143	134 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	KLHL22	Q53GT1	634 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	FAM76B	Q5HYJ3	339 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	PRAMEF6	Q5VXH4	476 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	TMEM42	Q69YG0	159 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	C11orf53	Q8IXP5	236 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	SPERT	Q8NA61	448 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	OR14K1	Q8NGZ2	314 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	ZNF420	Q8TAQ5	688 aa	Predicted RBP	13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	HPSE2	Q8WWQ2	592 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	ALG8	Q9BVK2	526 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	TLNRD1	Q9H1K6	362 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	PLCXD1	Q9NUJ7	323 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	GNG8	Q9UK08	70 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901	NPTN	Q9Y639	398 aa		13.78	□□□□□ -0.2
DDR1-261	ENST00000507901		H0YHG0	523 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	PIP	P12273	146 aa	Predicted RBP	13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	PSMB10	P40306	273 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	CCR9	P51686	369 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	ACTA2	P62736	377 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	ACTG2	P63267	376 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	C6orf52	Q5T4I8	152 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	AVPI1	Q5T686	147 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	THAP5	Q7Z6K1	395 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	LHFPL3	Q86UP9	236 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	MOGAT3	Q86VF5	341 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	OR2G2	Q8NGZ5	317 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	OR5P3	Q8WZ94	311 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	GGH	Q92820	318 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	C4orf36	Q96KX1	117 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	ISG20L2	Q9H9L3	353 aa	Known RBP	13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	FKBP14	Q9NWM8	211 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	DIMT1	Q9UNQ2	313 aa	Known RBP	13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	MPC1	Q9Y5U8	109 aa		13.77	□□□□□ -0.21
DDR1-261	ENST00000507901	IGHV3-64D	A0A0J9YX35	117 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	ZNF816-ZNF321P	A0A0X1KG74	233 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	P2RY10	O00398	339 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	DCK	P27707	260 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	MAP2K3	P46734	347 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	MVK	Q03426	396 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	PRDX4	Q13162	271 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	ZMYND11	Q15326	602 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	FAM220A	Q7Z4H9	259 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	LRRC28	Q86X40	367 aa	Predicted RBP	13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	ZNF485	Q8NCK3	441 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	SEMA6D	Q8NFY4	1073 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	MSI2	Q96DH6	328 aa	Known RBP	13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	PAPOLG	Q9BWT3	736 aa	Known RBP	13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	ABCB9	Q9NP78	766 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	FRRS1L	Q9P0K9	344 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	PSORS1C1	Q9UIG5	152 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	NAV3	Q8IVL0	2385 aa		13.76	□□□□□ -0.21
DDR1-261	ENST00000507901	OR4C45	A6NMZ5	311 aa		13.75	□□□□□ -0.21
DDR1-261	ENST00000507901	ZNF850	A8MQ14	1090 aa		13.75	□□□□□ -0.21
DDR1-261	ENST00000507901	CYB5R3	P00387	301 aa	Predicted RBP	13.75	□□□□□ -0.21
DDR1-261	ENST00000507901	IGHV2-5	P01817	119 aa		13.75	□□□□□ -0.21
DDR1-261	ENST00000507901	ISG15	P05161	165 aa		13.75	□□□□□ -0.21
DDR1-261	ENST00000507901	THBS2	P35442	1172 aa		13.75	□□□□□ -0.21
DDR1-261	ENST00000507901	GZMK	P49863	264 aa		13.75	□□□□□ -0.21
DDR1-261	ENST00000507901	ETV1	P50549	477 aa		13.75	□□□□□ -0.21
DDR1-261	ENST00000507901	BTG1	P62324	171 aa		13.75	□□□□□ -0.21
DDR1-261	ENST00000507901	RIPPLY1	Q0D2K3	151 aa		13.75	□□□□□ -0.21

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