RNA–Protein interactions for RNA: ENST00000507778.1

HMGB1P28-201, Transcript of high mobility group box 1 pseudogene 28, humanhuman

BASIC

Gene HMGB1P28, Length 552 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P28-201ENST00000507778 ZNF616Q08AN1 781 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 SLC25A35Q3KQZ1 300 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 LCE3AQ5TA76 89 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 LINC00336Q6ZUF6 198 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 VTCN1Q7Z7D3 282 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 ERO1BQ86YB8 467 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 OR5T1Q8NG75 326 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 DCAKDQ8WVC6 231 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 CDS1Q92903 461 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 KCNS1Q96KK3 526 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 C18orf15Q96N68 181 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 OR4K3Q96R72 315 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 CDX2Q99626 313 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 CHCHD7Q9BUK0 85 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 EMC6Q9BV81 110 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 SCRT1Q9BWW7 348 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 ZNF717Q9BY31 904 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 KRTAP4-3Q9BYR4 195 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 FBXO8Q9NRD0 319 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 S4R3C0 116 aa2.28□□□□□ -2.04
HMGB1P28-201ENST00000507778 A0A0A6YYD5 115 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 TRBV12-3P01733 135 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 DCNP07585 359 aaKnown RBP2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 HSPD1P10809 573 aaKnown RBP2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 OR1G1P47890 313 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 UBE2E1P51965 193 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 RPL18AQ02543 176 aaKnown RBP2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 OR1Q1Q15612 314 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 MFSD14CQ5VZR4 134 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 Q6ZSR6 202 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 NDUFAF7Q7L592 441 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 OR2W3Q7Z3T1 314 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 LINC00523Q86TU6 105 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 SLC30A8Q8IWU4 369 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 DRAM1Q8N682 238 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 TMEM104Q8NE00 496 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 OR1L1Q8NH94 360 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 RMI2Q96E14 147 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 RDH12Q96NR8 316 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 BCL7BQ9BQE9 202 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 NUDT9Q9BW91 350 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 OSBPL11Q9BXB4 747 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 ING2Q9H160 280 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 RBFOX1Q9NWB1 397 aaKnown RBP2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 CES1P1Q9UKY3 287 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 SIGLEC9Q9Y336 463 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 NEURL4Q96JN8 1562 aa2.27□□□□□ -2.05
HMGB1P28-201ENST00000507778 YEATS2Q9ULM3 1422 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 MYO10Q9HD67 2058 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 ARPC4-TTLL3A0A0A6YYG9 625 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 A0A0B4J2E0 115 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 A0A1W2PRF3 423 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 A0A1W2PRM7 423 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 CENPXA8MT69 81 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 ZNF701M0R085 212 aaPredicted RBP2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 M0R1X1 148 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 UPK1BO75841 260 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 LCA5LO95447 670 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 KLK1P06870 262 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 THRAP10827 490 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 GZMAP12544 262 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 PSMB5P28074 263 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 ARL2P36404 184 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 CFHR2P36980 270 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 DMC1Q14565 340 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 FAM222AQ5U5X8 452 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 SLC35D2Q76EJ3 337 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 DAW1Q8N136 415 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 ZNF321PQ8N8H1 164 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 WDR31Q8NA23 367 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 OR10Z1Q8NGY1 313 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 ENKURQ8TC29 256 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 TCP10LQ8TDR4 215 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 UBE2E2Q96LR5 201 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 SFXN3Q9BWM7 321 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 ARMC7Q9H6L4 198 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 TDRD3Q9H7E2 651 aaKnown RBP2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 IFNKQ9P0W0 207 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 ZMAT5Q9UDW3 170 aaKnown RBP2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 FARSAQ9Y285 508 aaKnown RBP2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 LRRC42Q9Y546 428 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 OR51B2Q9Y5P1 312 aa2.26□□□□□ -2.05
HMGB1P28-201ENST00000507778 SBNO1A3KN83 1393 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 DENND4AQ7Z401 1863 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 IGHV1-3A0A0C4DH29 117 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 LOC100653049A0A140TA62 436 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 BTNL10A8MVZ5 291 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 LINC01619G3V211 115 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 MYL12BO14950 172 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 PSPHP1O15172 72 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 SCO1O75880 301 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 KRT34O76011 436 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 CDRT1O95170 752 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 MBP02144 154 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 RPN2P04844 631 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 ZNF14P17017 642 aaPredicted RBP2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 CSKP41240 450 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 PAFAH1B2P68402 229 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 C6orf99Q4VX62 202 aa2.25□□□□□ -2.05
HMGB1P28-201ENST00000507778 DNLZQ5SXM8 178 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms