RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 ING2Q9H160 280 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 CLSTN2Q9H4D0 955 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 FBXO44Q9H4M3 255 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 PLEKHF2Q9H8W4 249 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 TREX1Q9NSU2 369 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 OR51B2Q9Y5P1 312 aa1.87□□□□□ -2.11
LSM6-205ENST00000507449 IGLV2-18A0A075B6J9 118 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 TRAV6A0A075B6T7 132 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 IGHV3-49A0A0A0MS15 119 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 LOC100653049A0A140TA62 436 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 TRDMT1O14717 391 aaKnown RBP1.86□□□□□ -2.11
LSM6-205ENST00000507449 EIF1BO60739 113 aaKnown RBP1.86□□□□□ -2.11
LSM6-205ENST00000507449 KRT34O76011 436 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 MT-ND4P03905 459 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 DCNP07585 359 aaKnown RBP1.86□□□□□ -2.11
LSM6-205ENST00000507449 GFAPP14136 432 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 ZNF14P17017 642 aaPredicted RBP1.86□□□□□ -2.11
LSM6-205ENST00000507449 EIF1P41567 113 aaKnown RBP1.86□□□□□ -2.11
LSM6-205ENST00000507449 PAFAH1B2P68402 229 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 PRSS8Q16651 343 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 HADHQ16836 314 aaKnown RBP1.86□□□□□ -2.11
LSM6-205ENST00000507449 C6orf99Q4VX62 202 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 TPRG1LQ5T0D9 272 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 GUSBP11Q6P575 273 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 OPN5Q6U736 354 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 CD300LGQ6UXG3 332 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 NEGR1Q7Z3B1 354 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 LINC00523Q86TU6 105 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 DAW1Q8N136 415 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 WDR31Q8NA23 367 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 GATSQ8NAP1 163 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 OR13G1Q8NGZ3 307 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 OR1L1Q8NH94 360 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 RXFP2Q8WXD0 754 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 OR8D1Q8WZ84 308 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 NAP1L5Q96NT1 182 aaPredicted RBP1.86□□□□□ -2.11
LSM6-205ENST00000507449 RNF157Q96PX1 679 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 KCNS3Q9BQ31 491 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 NUDT9Q9BW91 350 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 CHRAC1Q9NRG0 131 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 C21orf62Q9NYP8 219 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 FARSAQ9Y285 508 aaKnown RBP1.86□□□□□ -2.11
LSM6-205ENST00000507449 SIGLEC7Q9Y286 467 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 CBY1Q9Y3M2 126 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 HES2Q9Y543 173 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 TUBGCP6Q96RT7 1819 aa1.86□□□□□ -2.11
LSM6-205ENST00000507449 HACD1B0YJ81 288 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 M0R1X1 148 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 LGALS9O00182 355 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 CDRT1O95170 752 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 IL4P05112 153 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 CD5P06127 495 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 CRYGCP07315 174 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 IL1RNP18510 177 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 MSR1P21757 451 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 CPN2P22792 545 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 CXCR1P25024 350 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 PSMD4P55036 377 aaKnown RBP1.85□□□□□ -2.11
LSM6-205ENST00000507449 TAS2R39P59534 338 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 ELF3P78545 371 aaPredicted RBP1.85□□□□□ -2.11
LSM6-205ENST00000507449 PIGHQ14442 188 aaPredicted RBP1.85□□□□□ -2.11
LSM6-205ENST00000507449 DNLZQ5SXM8 178 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 STEAP4Q687X5 459 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 SLC30A8Q8IWU4 369 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 SLC35G3Q8N808 338 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 TMEM105Q8N8V8 129 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 FAM184AQ8NB25 1140 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 ST20-AS1Q8NBB2 130 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 UBAC2Q8NBM4 344 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 TCP10LQ8TDR4 215 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 DCAKDQ8WVC6 231 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 RTN4IP1Q8WWV3 396 aaPredicted RBP1.85□□□□□ -2.11
LSM6-205ENST00000507449 TFGQ92734 400 aaPredicted RBP1.85□□□□□ -2.11
LSM6-205ENST00000507449 CDS1Q92903 461 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 RERGQ96A58 199 aaPredicted RBP1.85□□□□□ -2.11
LSM6-205ENST00000507449 RCN3Q96D15 328 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 RMI2Q96E14 147 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 CHCHD7Q9BUK0 85 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 CHID1Q9BWS9 393 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 OSBPL11Q9BXB4 747 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 ULBP2Q9BZM5 246 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 CHRNA10Q9GZZ6 450 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 OR51B5Q9H339 312 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 TDRD3Q9H7E2 651 aaKnown RBP1.85□□□□□ -2.11
LSM6-205ENST00000507449 RHBDL2Q9NX52 303 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 ENOPH1Q9UHY7 261 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 CES1P1Q9UKY3 287 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 KIF26AQ9ULI4 1882 aaPredicted RBP1.85□□□□□ -2.11
LSM6-205ENST00000507449 DOCK8Q8NF50 2099 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 COL1A2P08123 1366 aa1.85□□□□□ -2.11
LSM6-205ENST00000507449 NUP214P35658 2090 aaPredicted RBP1.84□□□□□ -2.11
LSM6-205ENST00000507449 KIF27Q86VH2 1401 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 TRIOBPQ9H2D6 2365 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 PLIN3O60664 434 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 LCA5LO95447 670 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 SNAI1O95863 264 aaPredicted RBP1.84□□□□□ -2.11
LSM6-205ENST00000507449 PTTG1O95997 202 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 PRKACAP17612 351 aa1.84□□□□□ -2.11
LSM6-205ENST00000507449 YWHAEP62258 255 aaKnown RBP1.84□□□□□ -2.11
LSM6-205ENST00000507449 IFITM3Q01628 133 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms