RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 PRRC1Q96M27 445 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 OR4K3Q96R72 315 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 TEAD3Q99594 435 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 IL22Q9GZX6 179 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 MRM3Q9HC36 420 aaKnown RBP1.28□□□□□ -2.2
GYPB-207ENST00000506679 CRLF2Q9HC73 371 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 LYRM4Q9HD34 91 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 CHRAC1Q9NRG0 131 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 DDX18Q9NVP1 670 aaKnown RBP1.28□□□□□ -2.2
GYPB-207ENST00000506679 PEF1Q9UBV8 284 aaKnown RBP1.28□□□□□ -2.2
GYPB-207ENST00000506679 ZNF391Q9UJN7 358 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 UBIAD1Q9Y5Z9 338 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 TTC41PQ6P2S7 1318 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 UBN2Q6ZU65 1347 aa1.28□□□□□ -2.2
GYPB-207ENST00000506679 IGKV2-24A0A0C4DH68 120 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 TSPAN11A1L157 253 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 ANKRD65E5RJM6 399 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.27□□□□□ -2.21
GYPB-207ENST00000506679 OR7C2O60412 319 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 SLC16A7O60669 478 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 FCN3O75636 299 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 IGKV1D-16P01601 117 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 UBCP0CG48 685 aaKnown RBP1.27□□□□□ -2.21
GYPB-207ENST00000506679 GFAPP14136 432 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 PRKACAP17612 351 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 GABRG2P18507 467 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 NELFEP18615 380 aaKnown RBP1.27□□□□□ -2.21
GYPB-207ENST00000506679 MSR1P21757 451 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 TGFBR1P36897 503 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 RFC3P40938 356 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 RPS5P46782 204 aaKnown RBP1.27□□□□□ -2.21
GYPB-207ENST00000506679 CLDN8P56748 225 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 KRTAP12-3P60328 96 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 KRTAP12-4P60329 112 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 RAB11AP62491 216 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 DNAJC3Q13217 504 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 ZNF235Q14590 738 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 RAB11BQ15907 218 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 TRMT5Q32P41 509 aaKnown RBP1.27□□□□□ -2.21
GYPB-207ENST00000506679 TTC19Q6DKK2 380 aaPredicted RBP1.27□□□□□ -2.21
GYPB-207ENST00000506679 MED27Q6P2C8 311 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 CD300LGQ6UXG3 332 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 WDR82Q6UXN9 313 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 ZNF547Q8IVP9 402 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 STK40Q8N2I9 435 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 ZNF664Q8N3J9 261 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 DRAM1Q8N682 238 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 INO80EQ8NBZ0 244 aaPredicted RBP1.27□□□□□ -2.21
GYPB-207ENST00000506679 OR52E5Q8NH55 327 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 ENKURQ8TC29 256 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 RXFP4Q8TDU9 374 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 TVP23CQ96ET8 276 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 GPR21Q99679 349 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 KCNS3Q9BQ31 491 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 UQCC2Q9BRT2 126 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 NUDT9Q9BW91 350 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 CALN1Q9BXU9 219 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 BLZF1Q9H2G9 400 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 PIGUQ9H490 435 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 FANCEQ9HB96 536 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 BEX1Q9HBH7 125 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 CSNK1G1Q9HCP0 422 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 ZC4H2Q9NQZ6 224 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 PTTG3PQ9NZH4 202 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 MYEF2Q9P2K5 600 aaKnown RBP1.27□□□□□ -2.21
GYPB-207ENST00000506679 ZNF257Q9Y2Q1 563 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 LRRC42Q9Y546 428 aa1.27□□□□□ -2.21
GYPB-207ENST00000506679 DHX57Q6P158 1386 aaKnown RBP1.26□□□□□ -2.21
GYPB-207ENST00000506679 CCL15-CCL14A0A0B4J2E2 113 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 A0A1W2PNN7 141 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 CEACAM18A8MTB9 384 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 BCKDKO14874 412 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 XRCC2O43543 280 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 HSBP1O75506 76 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 GATBO75879 557 aaKnown RBP1.26□□□□□ -2.21
GYPB-207ENST00000506679 IFNW1P05000 195 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 INAFM2P0DMQ5 153 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 MYL9P24844 172 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 PCK1P35558 622 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 SERPINB8P50452 374 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 DAOAP59103 153 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 IFITM3Q01628 133 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 PRKCDQ05655 676 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 KDSRQ06136 332 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 ILKQ13418 452 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 DOC2AQ14183 400 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 DMC1Q14565 340 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 CCL15Q16663 113 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 HADHQ16836 314 aaKnown RBP1.26□□□□□ -2.21
GYPB-207ENST00000506679 SP6Q3SY56 376 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 LUZP6Q538Z0 58 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 HSP90AA4PQ58FG1 418 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 RWDD4Q6NW29 188 aaKnown RBP1.26□□□□□ -2.21
GYPB-207ENST00000506679 TBPL2Q6SJ96 375 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 OPN5Q6U736 354 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 VTCN1Q7Z7D3 282 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 NT5DC3Q86UY8 548 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 MDP1Q86V88 176 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 UBAC2Q8NBM4 344 aa1.26□□□□□ -2.21
GYPB-207ENST00000506679 ZNF680Q8NEM1 530 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms