RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 TRPM8Q7Z2W7 1104 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 PAPD5Q8NDF8 572 aaKnown RBP11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 OR52H1Q8NGJ2 320 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 OTOSQ8NHW6 89 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 PGAM5Q96HS1 289 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 PCGF1Q9BSM1 259 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 FGF23Q9GZV9 251 aaPredicted RBP11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 OR10A2Q9H208 303 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 SP140LQ9H930 580 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 RNPEPL1Q9HAU8 725 aa11.92□□□□□ -0.5
CDC42SE2-209ENST00000506419 DOCK11Q5JSL3 2073 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 CENPVL3A0A0U1RRI6 287 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 hCG_1807616A0A1W2PRN6 198 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 TCRBV3S1A0A5B6 114 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 DVL1O14640 695 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 ENSAO43768 121 aaKnown RBP11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 FKBP6O75344 327 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 APOC1P02654 83 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 LYNP07948 512 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 SLC2A5P22732 501 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 CBX1P83916 185 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 MZT1Q08AG7 82 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 GFOD2Q3B7J2 385 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 C16orf87Q6PH81 154 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 WDR82Q6UXN9 313 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 BTN2A1Q7KYR7 527 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 GALNT4Q8N4A0 578 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 OR8S1Q8NH09 359 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 LRRC29Q8WV35 223 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 CCL13Q99616 98 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 KAAG1Q9UBP8 84 aa11.91□□□□□ -0.5
CDC42SE2-209ENST00000506419 P2RY10O00398 339 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 CDIPTO14735 213 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 GYG2O15488 501 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 HOXA3O43365 443 aaPredicted RBP11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 LIPFP07098 398 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 ANXA8P13928 327 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 ALOX5APP20292 161 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 PAICSP22234 425 aaKnown RBP11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 NAA10P41227 235 aaPredicted RBP11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 ARF6P62330 175 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 SPATA24Q86W54 205 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 ZNF454Q8N9F8 522 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 SGMS2Q8NHU3 365 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 SLC25A28Q96A46 364 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 ITPKCQ96DU7 683 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 WDFY2Q96P53 400 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 SIRPDQ9H106 197 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 TLNRD1Q9H1K6 362 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 ZMAT3Q9HA38 289 aaKnown RBP11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 TRIM36Q9NQ86 728 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 DNAJB9Q9UBS3 223 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 POMPQ9Y244 141 aa11.9□□□□□ -0.5
CDC42SE2-209ENST00000506419 ZNF850A8MQ14 1090 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 PRR32B1ATL7 298 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 TMPRSS2O15393 492 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 SPRY1O43609 319 aaPredicted RBP11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 E2F6O75461 281 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 TOX4O94842 621 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 CFL1P23528 166 aaKnown RBP11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 TGM4P49221 684 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 DAPP51397 102 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 FLOT2Q14254 428 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 FAM76BQ5HYJ3 339 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 WDR38Q5JTN6 314 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 SLC35D3Q5M8T2 416 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 GPR157Q5UAW9 335 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 Q6YL49 198 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 LY6G5BQ8NDX9 201 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 CSNK2A3Q8NEV1 391 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 OR5T2Q8NGG2 359 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 OR5P3Q8WZ94 311 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 RPL3LQ92901 407 aaKnown RBP11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 UTP4Q969X6 686 aaKnown RBP11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 PPP1R14AQ96A00 147 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 TEAD3Q99594 435 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 CNTD2Q9H8S5 307 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 UNKLQ9H9P5 680 aaKnown RBP11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 ZNF556Q9HAH1 456 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 SLC25A19Q9HC21 320 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 TVP23BQ9NYZ1 205 aa11.89□□□□□ -0.51
CDC42SE2-209ENST00000506419 CCDC182A6NF36 153 aa11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 PSMD9O00233 223 aa11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 GSC2O15499 205 aa11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 PRODHO43272 600 aa11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 CST4P01036 141 aa11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 TFF1P04155 84 aa11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 MUC1P15941 1255 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 OMGP23515 440 aa11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 CRISP1P54107 249 aa11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 BPIFB3P59826 476 aa11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 PRDX4Q13162 271 aa11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 APOFQ13790 326 aa11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 MICBQ29980 383 aa11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 ATPAF1Q5TC12 328 aaPredicted RBP11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 SHISA2Q6UWI4 295 aa11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 KRT74Q7RTS7 529 aa11.88□□□□□ -0.51
CDC42SE2-209ENST00000506419 FAM216BQ8N7L0 139 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms