RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 UBAC2Q8NBM4 344 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 BPIFCQ8NFQ6 507 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR56B2PQ8NGI1 322 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR13C2Q8NGS9 318 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 ELMO1Q92556 727 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 RBPMSQ93062 196 aaKnown RBP0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 ABCG5Q9H222 651 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 PIGUQ9H490 435 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 ASB3Q9Y575 518 aa0.99□□□□□ -2.25
HMGB1P29-201ENST00000505659 C2orf16Q68DN1 1984 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 LOC102724200A0A096LPH7 203 aaPredicted RBP0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 A0A0A6YYD5 115 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 ISPDA4D126 451 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 IZUMO1RA6ND01 250 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 D6RAR5 112 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 ZNF73O43830 326 aaPredicted RBP0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 SLC19A2O60779 497 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 LCA5LO95447 670 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 TRBV12-3P01733 135 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 IGHMP01871 453 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 UQCRFS1P1P0C7P4 283 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 GABRG2P18507 467 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 MPIP34949 423 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 FABP6P51161 128 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 ACTR3P61158 418 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 LIPEQ05469 1076 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 TPBGQ13641 420 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 TSC22D1Q15714 1073 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 SSX2Q16385 188 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 MAJINQ3KP22 176 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 KDM4DQ6B0I6 523 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 TMPRSS11AQ6ZMR5 421 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 FA2HQ7L5A8 372 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 FAM228AQ86W67 206 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 HORMAD1Q86X24 394 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 ZFP62Q8NB50 900 aaPredicted RBP0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR4M2Q8NGB6 313 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR5AR1Q8NGP9 310 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR9G4Q8NGQ1 327 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 ACTR3CQ9C0K3 210 aaPredicted RBP0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 TMEM165Q9HC07 324 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 COX16Q9P0S2 106 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 PITPNC1Q9UKF7 332 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 RAB22AQ9UL26 194 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 SLC22A7Q9Y694 548 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 SIGLEC1Q9BZZ2 1709 aa0.98□□□□□ -2.25
HMGB1P29-201ENST00000505659 PRRC2BQ5JSZ5 2229 aaKnown RBP0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 HEATR9A2RTY3 570 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 M0R3G1 203 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 KCNK2O95069 426 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 OXTP01178 125 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 HBE1P02100 147 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR5AC1P0C628 307 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 TROVE2P10155 538 aaKnown RBP eCLIP0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 PTMSP20962 102 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 BCKDHBP21953 392 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 APLNRP35414 380 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR12D2P58182 307 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 PPP1CAP62136 330 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 DEFB103AP81534 67 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 PRAMEF20Q5VT98 475 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 TMEM236Q5W0B7 351 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 FAM104BQ5XKR9 115 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR4D6Q8NGJ1 314 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 OR8K3Q8NH51 312 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 ZNF420Q8TAQ5 688 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 RPEQ96AT9 228 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 SND1-IT1Q9HBX3 110 aa0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 MRM3Q9HC36 420 aaKnown RBP0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 KMT2BQ9UMN6 2715 aaPredicted RBP0.97□□□□□ -2.25
HMGB1P29-201ENST00000505659 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 HELZ2Q9BYK8 2649 aaKnown RBP0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 H0Y8G0 127 aa0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 SLC16A7O60669 478 aa0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 CD160O95971 181 aa0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 CTSGP08311 255 aa0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 MYL9P24844 172 aa0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 PCK1P35558 622 aa0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 SULT1E1P49888 294 aa0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 SERPINB8P50452 374 aa0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 FOXA1P55317 472 aa0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 ATP5IP56385 69 aaPredicted RBP0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 PDPNQ86YL7 162 aa0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 PKIBQ9C010 78 aa0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 SLC7A5P2Q9GIP4 190 aa0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 OR2S2Q9NQN1 319 aa0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 DYSFO75923 2080 aa0.96□□□□□ -2.26
HMGB1P29-201ENST00000505659 UBN2Q6ZU65 1347 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 IGKV1OR2-108A0A075B7D4 117 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 SMCO3A2RU48 225 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 OR2AG2A6NM03 316 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 ANKRD65E5RJM6 399 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 LSM1O15116 133 aaKnown RBP0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 RNF13O43567 381 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 FARS2O95363 451 aaKnown RBP0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 CSRP1P21291 193 aaKnown RBP0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 IL3RAP26951 378 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 CEP55Q53EZ4 464 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 MFSD14CQ5VZR4 134 aa0.95□□□□□ -2.26
HMGB1P29-201ENST00000505659 TTC23LQ6PF05 361 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms