RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 OSGIN2Q9Y236 505 aa10.5□□□□□ -0.73
UBE3D-206ENST00000505226 MYO7BQ6PIF6 2116 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 FBXO24O75426 580 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 MED6O75586 246 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 CD80P33681 288 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 DAP3P51398 398 aaKnown RBP10.49□□□□□ -0.73
UBE3D-206ENST00000505226 S100A10P60903 97 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 KLHL24Q6TFL4 600 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 RBMS3Q6XE24 437 aaKnown RBP10.49□□□□□ -0.73
UBE3D-206ENST00000505226 Q6ZS52 159 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 TMPRSS9Q7Z410 1059 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 ABHD12BQ7Z5M8 362 aaPredicted RBP10.49□□□□□ -0.73
UBE3D-206ENST00000505226 ARRDC1Q8N5I2 433 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 OR5D18Q8NGL1 313 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 MFSD8Q8NHS3 518 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 LMX1AQ8TE12 382 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 FAM71F1Q96KD3 344 aaPredicted RBP10.49□□□□□ -0.73
UBE3D-206ENST00000505226 C2orf50Q96LR7 162 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 CLCC1Q96S66 551 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 MRPL13Q9BYD1 178 aaKnown RBP10.49□□□□□ -0.73
UBE3D-206ENST00000505226 PARP12Q9H0J9 701 aaKnown RBP10.49□□□□□ -0.73
UBE3D-206ENST00000505226 GPR84Q9NQS5 396 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 BRWD1Q9NSI6 2320 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 IGKV1D-8A0A087WSZ0 117 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 CHRM2P08172 466 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 GSTP1P09211 210 aaKnown RBP10.49□□□□□ -0.73
UBE3D-206ENST00000505226 FPR2P25090 351 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 DHPSP49366 369 aaPredicted RBP10.49□□□□□ -0.73
UBE3D-206ENST00000505226 TGIF1Q15583 401 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 AKIRIN2Q53H80 203 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 MISPQ8IVT2 679 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 SAT2Q96F10 170 aaPredicted RBP10.49□□□□□ -0.73
UBE3D-206ENST00000505226 CDC6Q99741 560 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 TMEM59Q9BXS4 323 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 SEC61A2Q9H9S3 476 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 TAF9BQ9HBM6 251 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 CHST11Q9NPF2 352 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 KLHL13Q9P2N7 655 aa10.49□□□□□ -0.73
UBE3D-206ENST00000505226 RER1O15258 196 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 CRTAPO75718 401 aaPredicted RBP10.48□□□□□ -0.73
UBE3D-206ENST00000505226 OR8U9P0C7N5 309 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 ZNF708P17019 499 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 ZNF20P17024 532 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 ZNF121P58317 390 aaPredicted RBP10.48□□□□□ -0.73
UBE3D-206ENST00000505226 FOXF1Q12946 379 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 PEA15Q15121 130 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 DEFB133Q30KQ1 61 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 CLEC9AQ6UXN8 241 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 COMMD2Q86X83 199 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 OR5H2Q8NGV7 314 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 OR8U1Q8NH10 309 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 DAZLQ92904 295 aaKnown RBP10.48□□□□□ -0.73
UBE3D-206ENST00000505226 FBXO17Q96EF6 278 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 SERINC1Q9NRX5 453 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 MMP17Q9ULZ9 603 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 A0A1W2PPC4 97 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 SFTPBP07988 381 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 CBR1P16152 277 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 CCR5P51681 352 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 GPR85P60893 370 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 CFHR1Q03591 330 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 OR10H5Q8NGA6 315 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 SSC4DQ8WTU2 575 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 AKR1E2Q96JD6 320 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 C5orf34Q96MH7 638 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 NECAB3Q96P71 396 aaPredicted RBP10.48□□□□□ -0.73
UBE3D-206ENST00000505226 NAA11Q9BSU3 229 aaPredicted RBP10.48□□□□□ -0.73
UBE3D-206ENST00000505226 TMEM106CQ9BVX2 250 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 COPS7AQ9UBW8 275 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 UNC13CQ8NB66 2214 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 CEP290O15078 2479 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 A0A1W2PPE3 182 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 LIPT2A6NK58 231 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 ZNF814B7Z6K7 855 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 SCGNO76038 276 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 KNG1P01042 644 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 FOLR1P15328 257 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 FOSL2P15408 326 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 AMY2BP19961 511 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 KLK2P20151 261 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 LAP3P28838 519 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 PTGER4P35408 488 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 BLKP51451 505 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 RSPO4Q2I0M5 234 aaPredicted RBP10.48□□□□□ -0.73
UBE3D-206ENST00000505226 TMEM268Q5VZI3 342 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 ZNF784Q8NCA9 323 aaPredicted RBP10.48□□□□□ -0.73
UBE3D-206ENST00000505226 KCNG3Q8TAE7 436 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 BSCL2Q96G97 398 aaPredicted RBP10.48□□□□□ -0.73
UBE3D-206ENST00000505226 PNRC2Q9NPJ4 139 aaKnown RBP10.48□□□□□ -0.73
UBE3D-206ENST00000505226 CACFD1Q9UGQ2 172 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 WIF1Q9Y5W5 379 aa10.48□□□□□ -0.73
UBE3D-206ENST00000505226 LILRA5A6NI73 299 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 PRSS44E7EML9 344 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 HOXB1P14653 301 aaPredicted RBP10.47□□□□□ -0.73
UBE3D-206ENST00000505226 ZNF44P15621 663 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 SNU13P55769 128 aaKnown RBP10.47□□□□□ -0.73
UBE3D-206ENST00000505226 ACY1Q03154 408 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 Q7L0L9 218 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 SECTM1Q8WVN6 248 aa10.47□□□□□ -0.73
UBE3D-206ENST00000505226 LIN37Q96GY3 246 aaPredicted RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms