RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 PARP16Q8N5Y8 322 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 ZFP41Q8N8Y5 198 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 OR8G5Q8NG78 346 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 SYNPRQ8TBG9 265 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 HAVCR2Q8TDQ0 301 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 GHSRQ92847 366 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 ITFG2Q969R8 447 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 MUL1Q969V5 352 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 MBD6Q96DN6 1003 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 SORCS2Q96PQ0 1159 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 MGLLQ99685 303 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 KCNS3Q9BQ31 491 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 TLNRD1Q9H1K6 362 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 CXXC4Q9H2H0 198 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 ZNF275Q9NSD4 429 aaPredicted RBP4.19□□□□□ -1.74
LMNB1-208ENST00000504788 NKIRAS2Q9NYR9 191 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 MRPL15Q9P015 296 aaKnown RBP4.19□□□□□ -1.74
LMNB1-208ENST00000504788 EIF3KQ9UBQ5 218 aaKnown RBP4.19□□□□□ -1.74
LMNB1-208ENST00000504788 ZNF391Q9UJN7 358 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 LAMP3Q9UQV4 416 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 CMAHPQ9Y471 501 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 ATP23Q9Y6H3 246 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 HIVEP1P15822 2718 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 DSCAML1Q8TD84 2053 aa4.19□□□□□ -1.74
LMNB1-208ENST00000504788 MAGEA13PA6NCF6 341 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 TMEM212A6NML5 194 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 C17orf100A8MU93 164 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.18□□□□□ -1.74
LMNB1-208ENST00000504788 RP2O75695 350 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 GPX5O75715 221 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 LY6HO94772 140 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ALX3O95076 343 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 TNFAIP8O95379 198 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 IGHV4-39P01824 125 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 HPXP02790 462 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 HLA-DPB1P04440 258 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 UBCP0CG48 685 aaKnown RBP4.18□□□□□ -1.74
LMNB1-208ENST00000504788 NAT2P11245 290 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ATP6V1B1P15313 513 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 IGFBP3P17936 291 aaPredicted RBP4.18□□□□□ -1.74
LMNB1-208ENST00000504788 MYL12AP19105 171 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 CELP19835 753 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 CDKN1AP38936 164 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 DDOSTP39656 456 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 PMELP40967 661 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 GATA4P43694 442 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ALDH3B2P48448 385 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 RPS23P62266 143 aaKnown RBP4.18□□□□□ -1.74
LMNB1-208ENST00000504788 HOXA4Q00056 320 aaPredicted RBP4.18□□□□□ -1.74
LMNB1-208ENST00000504788 DMRTC1Q5HYR2 192 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ZBTB37Q5TC79 503 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 VHLLQ6RSH7 139 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ARL9Q6T311 187 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 PGAP1Q75T13 922 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 OR5AS1Q8N127 324 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ORAI1Q96D31 301 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 PGAM5Q96HS1 289 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 GFI1Q99684 422 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 GSX2Q9BZM3 304 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 CHST5Q9GZS9 411 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 OPA3Q9H6K4 179 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 UBTD1Q9HAC8 227 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 MSL2Q9HCI7 577 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 TRIM36Q9NQ86 728 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 NDUFB11Q9NX14 153 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 CGGBP1Q9UFW8 167 aaPredicted RBP4.18□□□□□ -1.74
LMNB1-208ENST00000504788 DUSP13Q9UII6 198 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 BLOC1S6Q9UL45 172 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ERGIC3Q9Y282 383 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ACANP16112 2415 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 MED13LQ71F56 2210 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 TRAV8-7A0A075B6U6 113 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 TRBV2A0A0J9YWF9 115 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 A6NIN4 97 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 M0R233 179 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 MYL12BO14950 172 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 GMDSO60547 372 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 FCN3O75636 299 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 RAF1P04049 648 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 FAHP16930 419 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ADRA2CP18825 462 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ACHEP22303 614 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 MPZP25189 248 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 THBS2P35442 1172 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 CRYBB2P43320 205 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 GBX2P52951 348 aaPredicted RBP4.18□□□□□ -1.74
LMNB1-208ENST00000504788 FABP5Q01469 135 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ZNF154Q13106 437 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 MED22Q15528 200 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 TAF13Q15543 124 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 MPPED2Q15777 294 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 TIGD6Q17RP2 521 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 ODF4Q2M2E3 257 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 YIF1BQ5BJH7 314 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 FAM27D1Q5T7N8 215 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 BCL2L15Q5TBC7 163 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 TMEM244Q5VVB8 128 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 AGAP6Q5VW22 663 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 LIPKQ5VXJ0 399 aa4.18□□□□□ -1.74
LMNB1-208ENST00000504788 UNQ6126/PRO20091Q6UXV3 157 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms