RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 RNPS1Q15287 305 aaKnown RBP12.49□□□□□ -0.41
TCOF1-207ENST00000504761 CLVS2Q5SYC1 327 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 DRAM2Q6UX65 266 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 SLC26A10Q8NG04 563 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 UBALD1Q8TB05 177 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 SCGB1C1Q8TD33 95 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 ABHD5Q8WTS1 349 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 SLC25A21Q9BQT8 299 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-207ENST00000504761 ZNF275Q9NSD4 429 aaPredicted RBP12.49□□□□□ -0.41
TCOF1-207ENST00000504761 PCDHB10Q9UN67 800 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 EGR4Q05215 589 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 SNX18Q96RF0 628 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 ZNF816-ZNF321PA0A0X1KG74 233 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 XRCC3O43542 346 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 SP1P08047 785 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 AADACL3Q5VUY0 350 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 ZDHHC23Q8IYP9 409 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 OR4C16Q8NGL9 310 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 RTL8AQ9BWD3 113 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 CHRNA10Q9GZZ6 450 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 CACNA1BQ00975 2339 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 UPK3AO75631 287 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 ACTBL2Q562R1 376 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 PLXDC2Q6UX71 529 aa12.49□□□□□ -0.41
TCOF1-207ENST00000504761 HNF4GQ14541 408 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 CREB3L2Q70SY1 520 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 OR10R2Q8NGX6 335 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 PP6455Q8WZ26 134 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 APOBEC3DQ96AK3 386 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-207ENST00000504761 DDOQ99489 341 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 TTTY12Q9BZ98 90 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 OMGP23515 440 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 ZNF83P51522 516 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 ZNF133P52736 654 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-207ENST00000504761 POU4F3Q15319 338 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 C17orf107Q6ZR85 190 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 ZNF709Q8N972 641 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 SUMF1Q8NBK3 374 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 APOBEC4Q8WW27 367 aaKnown RBP12.48□□□□□ -0.41
TCOF1-207ENST00000504761 VRK1Q99986 396 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-207ENST00000504761 CNTD2Q9H8S5 307 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 AGPAT2O15120 278 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 PHF1O43189 567 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-207ENST00000504761 NXPH3O95157 252 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 CRYABP02511 175 aaKnown RBP12.48□□□□□ -0.41
TCOF1-207ENST00000504761 OR8U9P0C7N5 309 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 FAM76BQ5HYJ3 339 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 TMEM251Q8N6I4 163 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 GLYATL2Q8WU03 294 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 TINAGL1Q9GZM7 467 aaPredicted RBP12.48□□□□□ -0.41
TCOF1-207ENST00000504761 FOXJ3Q9UPW0 622 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 INTS1Q8N201 2190 aaKnown RBP12.48□□□□□ -0.41
TCOF1-207ENST00000504761 DOCK7Q96N67 2140 aa12.48□□□□□ -0.41
TCOF1-207ENST00000504761 LOC101059948A0A1B0GTJ6 334 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 LINC00303Q3SY05 128 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 PPP1R32Q7Z5V6 425 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 OR51H1Q8NH63 302 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 ZNF2Q9BSG1 426 aaPredicted RBP12.47□□□□□ -0.41
TCOF1-207ENST00000504761 MRPS18AQ9NVS2 196 aaKnown RBP12.47□□□□□ -0.41
TCOF1-207ENST00000504761 A0A0A6YYJ9 748 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 CD300LBA8K4G0 201 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 DHRS3O75911 302 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 OR3A4PP47883 348 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 TSPO2Q5TGU0 170 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 PRSS35Q8N3Z0 413 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 OR52B4Q8NGK2 314 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 FBLIM1Q8WUP2 373 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 MIXL1Q9H2W2 232 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 SCPEP1Q9HB40 452 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 ATP23Q9Y6H3 246 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 MYLKQ15746 1914 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 ACTL6BO94805 426 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 IFNA5P01569 189 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 CA6P23280 308 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 ALKAL2Q6UX46 152 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 FAM109AQ8N4B1 249 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 MARCH1Q8TCQ1 289 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 SPIN2AQ99865 258 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 SPIN2BQ9BPZ2 258 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 ANGPTL4Q9BY76 406 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 B3GAT1Q9P2W7 334 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 LSM2Q9Y333 95 aaKnown RBP12.47□□□□□ -0.41
TCOF1-207ENST00000504761 PLXNA4Q9HCM2 1894 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 TMEM272A0A1B0GTI8 110 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 TUSC2O75896 110 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 GALP22466 123 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 ZNF468Q5VIY5 522 aaPredicted RBP12.47□□□□□ -0.41
TCOF1-207ENST00000504761 LHFPL2Q6ZUX7 228 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 OR11L1Q8NGX0 322 aa12.47□□□□□ -0.41
TCOF1-207ENST00000504761 ZNF230Q9UIE0 474 aaPredicted RBP12.47□□□□□ -0.41
TCOF1-207ENST00000504761 TMEM229AB2RXF0 380 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 NPIPB9F8W1W9 429 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 NFYBP25208 207 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 KIF26BQ2KJY2 2108 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 ZNF718Q3SXZ3 478 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 H1FXQ92522 213 aaKnown RBP12.46□□□□□ -0.41
TCOF1-207ENST00000504761 SLAMF9Q96A28 289 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 DDA1Q9BW61 102 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 RTN4RQ9BZR6 473 aa12.46□□□□□ -0.41
TCOF1-207ENST00000504761 DECR2Q9NUI1 292 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms