RNA–Protein interactions for RNA: ENST00000503827.5

PDLIM7-210, Transcript of PDZ and LIM domain 7, humanhuman

TSL 5

Gene PDLIM7, Length 451 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-210ENST00000503827 OPA3Q9H6K4 179 aa12.75□□□□□ -0.37
PDLIM7-210ENST00000503827 SRA1Q9HD15 236 aaKnown RBP12.75□□□□□ -0.37
PDLIM7-210ENST00000503827 PNRC2Q9NPJ4 139 aaKnown RBP12.75□□□□□ -0.37
PDLIM7-210ENST00000503827 SNTG1Q9NSN8 517 aa12.75□□□□□ -0.37
PDLIM7-210ENST00000503827 ZMAT5Q9UDW3 170 aaKnown RBP12.75□□□□□ -0.37
PDLIM7-210ENST00000503827 IER3IP1Q9Y5U9 82 aa12.75□□□□□ -0.37
PDLIM7-210ENST00000503827 DYNC2H1Q8NCM8 4307 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 A0A087WUU8 490 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 IGLV1-36A0A0B4J1U3 117 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 A6NDX4 124 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 DCTN6O00399 190 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 CHRM2P08172 466 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 DDOSTP39656 456 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 YAP1P46937 504 aaKnown RBP12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 RAB13P51153 203 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 GMFBP60983 142 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 TMEM95Q3KNT9 176 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 PLA1AQ53H76 456 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 CYBRD1Q53TN4 286 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 Q6ZS46 218 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 MBOAT2Q6ZWT7 520 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 CENPVQ7Z7K6 275 aaPredicted RBP12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 MKXQ8IYA7 352 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 FAM185AQ8N0U4 392 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 KRTAP17-1Q9BYP8 105 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 CYB5R1Q9UHQ9 305 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 B9D1Q9UPM9 204 aa12.74□□□□□ -0.37
PDLIM7-210ENST00000503827 LCE6AA0A183 80 aa12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 CDIPTO14735 213 aa12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 SIGLEC5O15389 551 aa12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 RPS6KA3P51812 740 aa12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 BLCAPP62952 87 aa12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 TBPL2Q6SJ96 375 aa12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 DRAM2Q6UX65 266 aa12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 UNQ9370/PRO34162Q6UXP9 181 aa12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 CPLX4Q7Z7G2 160 aa12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 MREGQ8N565 214 aa12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 LINC00482Q8N8I6 264 aa12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 ZBTB9Q96C00 473 aa12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 RAB3IPQ96QF0 476 aaPredicted RBP12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 GPX7Q96SL4 187 aaPredicted RBP12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 ELL3Q9HB65 397 aaPredicted RBP12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 TMEM5Q9Y2B1 443 aa12.73□□□□□ -0.37
PDLIM7-210ENST00000503827 HLA-DQA2P01906 255 aa12.72□□□□□ -0.37
PDLIM7-210ENST00000503827 TFF1P04155 84 aa12.72□□□□□ -0.37
PDLIM7-210ENST00000503827 ACAA1P09110 424 aaPredicted RBP12.72□□□□□ -0.37
PDLIM7-210ENST00000503827 TROVE2P10155 538 aaKnown RBP eCLIP12.72□□□□□ -0.37
PDLIM7-210ENST00000503827 LRRC23Q53EV4 343 aaPredicted RBP12.72□□□□□ -0.37
PDLIM7-210ENST00000503827 TCTEX1D4Q5JR98 221 aa12.72□□□□□ -0.37
PDLIM7-210ENST00000503827 OR6V1Q8N148 313 aa12.72□□□□□ -0.37
PDLIM7-210ENST00000503827 ANGPTL6Q8NI99 470 aa12.72□□□□□ -0.37
PDLIM7-210ENST00000503827 MYDGFQ969H8 173 aa12.72□□□□□ -0.37
PDLIM7-210ENST00000503827 MAP6Q96JE9 813 aa12.72□□□□□ -0.37
PDLIM7-210ENST00000503827 MCRIP2Q9BUT9 160 aaKnown RBP12.72□□□□□ -0.37
PDLIM7-210ENST00000503827 WDR13Q9H1Z4 485 aa12.72□□□□□ -0.37
PDLIM7-210ENST00000503827 NKIRAS1Q9NYS0 192 aa12.72□□□□□ -0.37
PDLIM7-210ENST00000503827 SIGLEC7Q9Y286 467 aa12.72□□□□□ -0.37
PDLIM7-210ENST00000503827 hCG_1809904A0A1W2PP81 198 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 A0A1W2PPE2 198 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 A0A1W2PPH5 198 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 A0A1W2PR64 198 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 A0A1W2PRV1 198 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 J3KTA2 159 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 XRCC2O43543 280 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 PTP4A3O75365 173 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 TXNDC12O95881 172 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 IFNW1P05000 195 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 CCDC159P0C7I6 412 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 ANOS1P23352 680 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 COX7A1P24310 79 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 GNALP38405 381 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 GABRA2P47869 451 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 SLC7A2P52569 658 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 SELENOWP63302 87 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 DGCR2P98153 550 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 SPIBQ01892 262 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 KHDC1LQ5JSQ8 128 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 NKAPLQ5M9Q1 402 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 NANOGP8Q6NSW7 305 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 ERICH5Q6P6B1 374 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 DPY19L2P2Q6ZN68 376 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 LHFPL4Q7Z7J7 247 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 CYB561A3Q8NBI2 242 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 OR4X2Q8NGF9 303 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 OR10Z1Q8NGY1 313 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 OR5K1Q8NHB7 308 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 FOXRED1Q96CU9 486 aaPredicted RBP12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 FAM46AQ96IP4 442 aaKnown RBP12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 SH3GL1Q99961 368 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 NSRP1Q9H0G5 558 aaKnown RBP12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 TLNRD1Q9H1K6 362 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 N6AMT1Q9Y5N5 214 aa12.71□□□□□ -0.37
PDLIM7-210ENST00000503827 FAM90A8PA6NJQ4 464 aa12.7□□□□□ -0.38
PDLIM7-210ENST00000503827 FFAR1O14842 300 aa12.7□□□□□ -0.38
PDLIM7-210ENST00000503827 RENP00797 406 aa12.7□□□□□ -0.38
PDLIM7-210ENST00000503827 OTX1P32242 354 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-210ENST00000503827 KDELR2P33947 212 aa12.7□□□□□ -0.38
PDLIM7-210ENST00000503827 MXRA7P84157 204 aa12.7□□□□□ -0.38
PDLIM7-210ENST00000503827 CYLC2Q14093 348 aaPredicted RBP12.7□□□□□ -0.38
PDLIM7-210ENST00000503827 CROCCP2Q86T23 111 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 147.7 ms