RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 RAD51CO43502 376 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 SMIM24O75264 130 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 GLSO94925 669 aaPredicted RBP3.86□□□□□ -1.79
NIPBL-203ENST00000503274 SCELO95171 688 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 SNX4O95219 450 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 CLDN9O95484 217 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 ETHE1O95571 254 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 RBP1P09455 135 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 SLC35E2BP0CK96 405 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 THRBP10828 461 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 DEKP35659 375 aaKnown RBP3.86□□□□□ -1.79
NIPBL-203ENST00000503274 MAGEA5P43359 124 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 SERPINB8P50452 374 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 SERPINB9P50453 376 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 CCNG1P51959 295 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 NUP107P57740 925 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 TNFRSF17Q02223 184 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 CKAP4Q07065 602 aaKnown RBP3.86□□□□□ -1.79
NIPBL-203ENST00000503274 PSG7Q13046 419 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 IFT88Q13099 833 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 UAP1Q16222 522 aaPredicted RBP3.86□□□□□ -1.79
NIPBL-203ENST00000503274 ZNF791Q3KP31 576 aaPredicted RBP3.86□□□□□ -1.79
NIPBL-203ENST00000503274 FAM74A3Q4VXF1 159 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 FBXO48Q5FWF7 155 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 C1orf185Q5T7R7 199 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 TTC19Q6DKK2 380 aaPredicted RBP3.86□□□□□ -1.79
NIPBL-203ENST00000503274 OR52E8Q6IFG1 317 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 SPNS3Q6ZMD2 512 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 C16orf47Q6ZP98 133 aaPredicted RBP3.86□□□□□ -1.79
NIPBL-203ENST00000503274 CTAGE6Q86UF2 777 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 ZCCHC7Q8N3Z6 543 aaKnown RBP3.86□□□□□ -1.79
NIPBL-203ENST00000503274 TMEM251Q8N6I4 163 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 OR4K14Q8NGD5 310 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 PAQR8Q8TEZ7 354 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 ZNF721Q8TF20 911 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 JSRP1Q96MG2 331 aaPredicted RBP3.86□□□□□ -1.79
NIPBL-203ENST00000503274 SECISBP2Q96T21 854 aaKnown RBP3.86□□□□□ -1.79
NIPBL-203ENST00000503274 SERPINI1Q99574 410 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 DOHHQ9BU89 302 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 OR51B5Q9H339 312 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 LIN28AQ9H9Z2 209 aaKnown RBP3.86□□□□□ -1.79
NIPBL-203ENST00000503274 NGBQ9NPG2 151 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 RDH8Q9NYR8 311 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 ZNF223Q9UK11 482 aaPredicted RBP3.86□□□□□ -1.79
NIPBL-203ENST00000503274 ACANP16112 2415 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 MPDZO75970 2070 aa3.86□□□□□ -1.79
NIPBL-203ENST00000503274 C15orf38-AP3S2A0A0A6YYH1 394 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 IGHV7-81A0A0B4J1V7 117 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 NKX2-6A6NCS4 301 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 GOLGA6L10A6NI86 522 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 PLPP1O14494 284 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 TRAPPC6AO75865 159 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 PIAS1O75925 651 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 SEMA3DO95025 777 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 KLHL2O95198 593 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 WISP3O95389 354 aaPredicted RBP3.85□□□□□ -1.79
NIPBL-203ENST00000503274 PTBP3O95758 552 aaKnown RBP3.85□□□□□ -1.79
NIPBL-203ENST00000503274 C1QAP02745 245 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 IGKV3-11P04433 115 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 C2P06681 752 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 OR8U8P0C7N1 319 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 CCL3P10147 92 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 IGLL1P15814 213 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 FUT3P21217 361 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 GABRR1P24046 479 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 DNASE1L1P49184 302 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 XKP51811 444 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 GPX6P59796 221 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 PSPHP78330 225 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 MRPS25P82663 173 aaKnown RBP3.85□□□□□ -1.79
NIPBL-203ENST00000503274 HSF2Q03933 536 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 ST3GAL3Q11203 375 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 RCAN2Q14206 197 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 AANATQ16613 207 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 RIPPLY2Q5TAB7 128 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 PRAMEF20Q5VT98 475 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 ADNP2Q6IQ32 1131 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 C8orf74Q6P047 294 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 ARSKQ6UWY0 536 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 DNM1P46Q6ZS02 220 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 NCCRP1Q6ZVX7 275 aaPredicted RBP3.85□□□□□ -1.79
NIPBL-203ENST00000503274 LHFPL4Q7Z7J7 247 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 CMC1Q7Z7K0 106 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 MISPQ8IVT2 679 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 LRRC25Q8N386 305 aaPredicted RBP3.85□□□□□ -1.79
NIPBL-203ENST00000503274 ZNF321PQ8N8H1 164 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 ACBD4Q8NC06 268 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 MNS1Q8NEH6 495 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 OR7G1Q8NGA0 311 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 OR5AU1Q8NGC0 362 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 OR8H1Q8NGG4 311 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 NEIL3Q8TAT5 605 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 KCTD4Q8WVF5 259 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 PPWD1Q96BP3 646 aaKnown RBP3.85□□□□□ -1.79
NIPBL-203ENST00000503274 SLC30A2Q9BRI3 323 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 FAIM2Q9BWQ8 316 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 UCK2Q9BZX2 261 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 C1orf21Q9H246 121 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 PPDPFQ9H3Y8 114 aa3.85□□□□□ -1.79
NIPBL-203ENST00000503274 ELOVL6Q9H5J4 265 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms