RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 CCNB2O95067 398 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 FSTL3O95633 263 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 IGHV1-46P01743 117 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 HBE1P02100 147 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 FTH1P02794 183 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 UQCRFS1P1P0C7P4 283 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 PGA4P0DJD7 388 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 PGA3P0DJD8 388 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 CTRB1P17538 263 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 RAB4AP20338 218 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 MYCNOSP40205 109 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 KLF3P57682 345 aaPredicted RBP0.91□□□□□ -2.26
SMAD1-203ENST00000502342 TPBGQ13641 420 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 MAJINQ3KP22 176 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 MORN3Q6PF18 240 aaPredicted RBP0.91□□□□□ -2.26
SMAD1-203ENST00000502342 WDR59Q6PJI9 974 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 SPESP1Q6UW49 350 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 Q6ZS52 159 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 SLC25A29Q8N8R3 303 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 OTUB2Q96DC9 234 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 SGTBQ96EQ0 304 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 PRRC1Q96M27 445 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 NUP58Q9BVL2 599 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 CALN1Q9BXU9 219 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 ZNF442Q9H7R0 627 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 TMEM165Q9HC07 324 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 OR2S2Q9NQN1 319 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 INIPQ9NRY2 104 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 PTTG3PQ9NZH4 202 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 RAB22AQ9UL26 194 aa0.91□□□□□ -2.26
SMAD1-203ENST00000502342 CAB39Q9Y376 341 aaPredicted RBP0.91□□□□□ -2.26
SMAD1-203ENST00000502342 FCGBPQ9Y6R7 5405 aaPredicted RBP0.9□□□□□ -2.26
SMAD1-203ENST00000502342 UBN2Q6ZU65 1347 aa0.9□□□□□ -2.26
SMAD1-203ENST00000502342 FBN3Q75N90 2809 aa0.9□□□□□ -2.26
SMAD1-203ENST00000502342 COL5A3P25940 1745 aaPredicted RBP0.9□□□□□ -2.27
SMAD1-203ENST00000502342 COL11A1P12107 1806 aaPredicted RBP0.9□□□□□ -2.27
SMAD1-203ENST00000502342 LOC102724200A0A096LPH7 203 aaPredicted RBP0.9□□□□□ -2.27
SMAD1-203ENST00000502342 A0A0A6YYD5 115 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 TRBV9A0A0B4J1U6 114 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 TSPAN11A1L157 253 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 SLC19A2O60779 497 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 CIB2O75838 187 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 KCNK2O95069 426 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 TRBV12-3P01733 135 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 IGHG2P01859 326 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 CLTAP09496 248 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 RFC3P40938 356 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 PPICP45877 212 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 MRPL19P49406 292 aaKnown RBP0.9□□□□□ -2.27
SMAD1-203ENST00000502342 KDSRQ06136 332 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 FMODQ06828 376 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 C6orf99Q4VX62 202 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 TAS2R42Q7RTR8 314 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 OR4C13Q8NGP0 309 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 ZNF420Q8TAQ5 688 aaPredicted RBP0.9□□□□□ -2.27
SMAD1-203ENST00000502342 MUC7Q8TAX7 377 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 YIPF6Q96EC8 236 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 EMC6Q9BV81 110 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 SFXN3Q9BWM7 321 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 VSIRQ9H7M9 311 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 ACP6Q9NPH0 428 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 RBFOX1Q9NWB1 397 aaKnown RBP0.9□□□□□ -2.27
SMAD1-203ENST00000502342 STX18Q9P2W9 335 aaKnown RBP0.9□□□□□ -2.27
SMAD1-203ENST00000502342 RAB23Q9ULC3 237 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 ASB3Q9Y575 518 aa0.9□□□□□ -2.27
SMAD1-203ENST00000502342 BRCA1P38398 1863 aaKnown RBP0.9□□□□□ -2.27
SMAD1-203ENST00000502342 CACNA1GO43497 2377 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 IGKV1-6A0A0C4DH72 117 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 MPHOSPH10O00566 681 aaKnown RBP0.89□□□□□ -2.27
SMAD1-203ENST00000502342 OVOL1O14753 267 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 CPSF4O95639 269 aaKnown RBP0.89□□□□□ -2.27
SMAD1-203ENST00000502342 CD160O95971 181 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 IGKV1-16P04430 117 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 CBR1P16152 277 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 PRPS1L1P21108 318 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 UQCRFS1P47985 274 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 RGS8P57771 180 aaPredicted RBP0.89□□□□□ -2.27
SMAD1-203ENST00000502342 OR12D2P58182 307 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 IL5RAQ01344 420 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 CEP55Q53EZ4 464 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 PDZD11Q5EBL8 140 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 ZNF678Q5SXM1 525 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 LDLRAD2Q5SZI1 272 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 CCDC183Q5T5S1 534 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 LIN9Q5TKA1 542 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 PRAMEF20Q5VT98 475 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 HHATQ5VTY9 493 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 ZNF470Q6ECI4 717 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 PDPNQ86YL7 162 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 VKORC1L1Q8N0U8 176 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 OR10W1Q8NGF6 305 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 OR4D6Q8NGJ1 314 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 ALS2CR12Q96Q35 445 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 GSDMAQ96QA5 445 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 XPO6Q96QU8 1125 aaKnown RBP0.89□□□□□ -2.27
SMAD1-203ENST00000502342 TEAD3Q99594 435 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 GPR21Q99679 349 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 MS4A8Q9BY19 250 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 TBL1XR1Q9BZK7 514 aa0.89□□□□□ -2.27
SMAD1-203ENST00000502342 UCK2Q9BZX2 261 aa0.89□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms