RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 GYPCP04921 128 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 LGALS1P09382 135 aaKnown RBP3.34□□□□□ -1.87
CSTF1-207ENST00000498689 PIPP12273 146 aaPredicted RBP3.34□□□□□ -1.87
CSTF1-207ENST00000498689 MLNP12872 115 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 GFAPP14136 432 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 EDN2P20800 178 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 CD247P20963 164 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 ANOS1P23352 680 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 CHI3L1P36222 383 aaPredicted RBP3.34□□□□□ -1.87
CSTF1-207ENST00000498689 CETN2P41208 172 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 GABRA2P47869 451 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 RAB9AP51151 201 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 ZNF84P51523 738 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 ALDH18A1P54886 795 aaKnown RBP3.34□□□□□ -1.87
CSTF1-207ENST00000498689 ACTA2P62736 377 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 RPL31P62899 125 aaKnown RBP3.34□□□□□ -1.87
CSTF1-207ENST00000498689 ACTG2P63267 376 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 ACTC1P68032 377 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 ACTA1P68133 377 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 MRPS34P82930 218 aaKnown RBP3.34□□□□□ -1.87
CSTF1-207ENST00000498689 TAGLNQ01995 201 aaKnown RBP3.34□□□□□ -1.87
CSTF1-207ENST00000498689 PUDPQ08623 228 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 TOP3AQ13472 1001 aaPredicted RBP3.34□□□□□ -1.87
CSTF1-207ENST00000498689 ENDOGQ14249 297 aaKnown RBP3.34□□□□□ -1.87
CSTF1-207ENST00000498689 DPY19L1Q2PZI1 675 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 GFOD2Q3B7J2 385 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 LSM12Q3MHD2 195 aaKnown RBP3.34□□□□□ -1.87
CSTF1-207ENST00000498689 MRPL2Q5T653 305 aaKnown RBP3.34□□□□□ -1.87
CSTF1-207ENST00000498689 FAM69AQ5T7M9 428 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 OTPQ5XKR4 325 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 CFAP77Q6ZQR2 320 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 ADPRHL1Q8NDY3 354 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 GRK7Q8WTQ7 553 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 SLC25A44Q96H78 314 aaPredicted RBP3.34□□□□□ -1.87
CSTF1-207ENST00000498689 ANP32EQ9BTT0 268 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 KRTAP1-5Q9BYS1 174 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 YY1AP1Q9H869 796 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.34□□□□□ -1.87
CSTF1-207ENST00000498689 NMRK1Q9NWW6 199 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 NSMCE4AQ9NXX6 385 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 WDR45Q9Y484 360 aa3.34□□□□□ -1.87
CSTF1-207ENST00000498689 IGKV1D-17A0A075B6S4 117 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 FAM172BPA6NC97 362 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 FAM90A18PA6NE21 464 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 FAM90A16PA6NEW6 464 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 FAM90A20PA6NIJ5 464 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 FAM90A9PA6NNJ1 464 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 FAM90A12PA8MX19 464 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 FAM90A5PA8MXJ8 464 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 BMPR1BO00238 502 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 DLGAP1O14490 977 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 FGF16O43320 207 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 C1QCP02747 245 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 HSPB1P04792 205 aaKnown RBP3.33□□□□□ -1.88
CSTF1-207ENST00000498689 FAM90A15PP0C7V4 464 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 FAM90A13PP0C7W8 464 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 FAM90A14PP0C7W9 464 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 FAM90A24PP0C7X0 464 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 CPA3P15088 417 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 BTF3P20290 206 aaKnown RBP3.33□□□□□ -1.88
CSTF1-207ENST00000498689 VDAC1P21796 283 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 MATN1P21941 496 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 HTR1DP28221 377 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 PPIFP30405 207 aaKnown RBP3.33□□□□□ -1.88
CSTF1-207ENST00000498689 MDH1P40925 334 aaKnown RBP3.33□□□□□ -1.88
CSTF1-207ENST00000498689 HOXC5Q00444 222 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 IL18R1Q13478 541 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 GALEQ14376 348 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 GSTA3Q16772 222 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 SPANXN3Q5MJ09 141 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 SPDYAQ5MJ70 313 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 WBP2NLQ6ICG8 309 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 SLC2A7Q6PXP3 512 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 SMARCD3Q6STE5 483 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 C16orf62Q7Z3J2 963 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 PXKQ7Z7A4 578 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 CMC1Q7Z7K0 106 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 NR2C2APQ86WQ0 139 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 OR9G4Q8NGQ1 327 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 OR2T27Q8NH04 317 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 ZFP28Q8NHY6 868 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 LIPHQ8WWY8 451 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 C12orf43Q96C57 262 aaKnown RBP3.33□□□□□ -1.88
CSTF1-207ENST00000498689 CFAP36Q96G28 342 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 MED30Q96HR3 178 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 RAB3IPQ96QF0 476 aaPredicted RBP3.33□□□□□ -1.88
CSTF1-207ENST00000498689 MNTQ99583 582 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 ZBTB18Q99592 522 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 RARRES2Q99969 163 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 ERP44Q9BS26 406 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 GON7Q9BXV9 100 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 CPSF2Q9P2I0 782 aaKnown RBP3.33□□□□□ -1.88
CSTF1-207ENST00000498689 SLC13A4Q9UKG4 626 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 AURKCQ9UQB9 309 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 TIMM10BQ9Y5J6 103 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 ATP6V1DQ9Y5K8 247 aa3.33□□□□□ -1.88
CSTF1-207ENST00000498689 DEFB131BA0A096LNP1 70 aa3.32□□□□□ -1.88
CSTF1-207ENST00000498689 MMP23AO75900 390 aa3.32□□□□□ -1.88
CSTF1-207ENST00000498689 NDUFB2O95178 105 aa3.32□□□□□ -1.88
CSTF1-207ENST00000498689 CST2P09228 141 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms