RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 GMFBP60983 142 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.98□□□□□ -0.49
TRAF4-212ENST00000498540 ACSM1Q08AH1 577 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 HCP5Q6MZN7 132 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 C11orf88Q6PI97 169 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 CRIP3Q6Q6R5 217 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 SLC16A9Q7RTY1 509 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 ZDHHC21Q8IVQ6 265 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 CYB561A3Q8NBI2 242 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 OR51L1Q8NGJ5 315 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 OR2T6Q8NHC8 308 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 C12orf43Q96C57 262 aaKnown RBP11.98□□□□□ -0.49
TRAF4-212ENST00000498540 AJUBAQ96IF1 538 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 WDR13Q9H1Z4 485 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 SNTG1Q9NSN8 517 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 FGFR1OP2Q9NVK5 253 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 MAB21L2Q9Y586 359 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 COMMD3-BMI1R4GMX3 469 aa11.98□□□□□ -0.49
TRAF4-212ENST00000498540 M0R1W7 72 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 CDIPTO14735 213 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 TBX1O43435 398 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 DDOSTP39656 456 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 FAM3AP98173 230 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 NSUN5P1Q3KNT7 163 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 ATPAF1Q5TC12 328 aaPredicted RBP11.97□□□□□ -0.49
TRAF4-212ENST00000498540 NCR3LG1Q68D85 454 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 C8orf82Q6P1X6 216 aaPredicted RBP11.97□□□□□ -0.49
TRAF4-212ENST00000498540 PROKR2Q8NFJ6 384 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 OR4C15Q8NGM1 316 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 SGCDQ92629 289 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 SLAMF6Q96DU3 332 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 GAFA1Q96PS6 74 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 KCNJ15Q99712 375 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 KCTD14Q9BQ13 255 aaPredicted RBP11.97□□□□□ -0.49
TRAF4-212ENST00000498540 TLNRD1Q9H1K6 362 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 METTL8Q9H825 291 aaKnown RBP11.97□□□□□ -0.49
TRAF4-212ENST00000498540 CENPMQ9NSP4 180 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 NECAP2Q9NVZ3 263 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 HAO2Q9NYQ3 351 aa11.97□□□□□ -0.49
TRAF4-212ENST00000498540 A0A1W2PQ09 198 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 IDH3BO43837 385 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 CHST1O43916 411 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 TIPRLO75663 272 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 SPARCP09486 303 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 NAA10P41227 235 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-212ENST00000498540 TAF13Q15543 124 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 DGUOKQ16854 277 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 LRRC75BQ2VPJ9 315 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 KLHL12Q53G59 568 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 ZNF788Q6ZQV5 615 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 OR51G2Q8NGK0 314 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 OR9Q1Q8NGQ5 310 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 PHF21AQ96BD5 680 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 CLPTM1LQ96KA5 538 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 DDOQ99489 341 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 MMP28Q9H239 520 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 RANBP3Q9H6Z4 567 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-212ENST00000498540 ELL3Q9HB65 397 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-212ENST00000498540 SLC25A10Q9UBX3 287 aaPredicted RBP11.96□□□□□ -0.49
TRAF4-212ENST00000498540 ZNF391Q9UJN7 358 aa11.96□□□□□ -0.49
TRAF4-212ENST00000498540 COL7A1Q02388 2944 aa11.96□□□□□ -0.5
TRAF4-212ENST00000498540 hCG_38984A0A1B0GV85 526 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 NKX6-3A6NJ46 265 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 ZNF878C9JN71 531 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 XPNPEP2O43895 674 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 GADD45GO95257 159 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 NDUFB7P17568 137 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 GSSP48637 474 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 CX3CR1P49238 355 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 MXRA7P84157 204 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 SPIBQ01892 262 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 KRT72Q14CN4 511 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 TIGD6Q17RP2 521 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 PGBD2Q6P3X8 592 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 OR2T4Q8NH00 348 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 ANGPTL6Q8NI99 470 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 RP9Q8TA86 221 aaKnown RBP11.95□□□□□ -0.5
TRAF4-212ENST00000498540 SGK3Q96BR1 496 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 DUS3LQ96G46 650 aaKnown RBP11.95□□□□□ -0.5
TRAF4-212ENST00000498540 REEP6Q96HR9 211 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 RAB3IPQ96QF0 476 aaPredicted RBP11.95□□□□□ -0.5
TRAF4-212ENST00000498540 PAPOLGQ9BWT3 736 aaKnown RBP11.95□□□□□ -0.5
TRAF4-212ENST00000498540 FAM234AQ9H0X4 552 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 DNTTIP1Q9H147 329 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 EGLN3Q9H6Z9 239 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 DCAF13Q9NV06 445 aaKnown RBP11.95□□□□□ -0.5
TRAF4-212ENST00000498540 RHBDD3Q9Y3P4 386 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 V9GYQ6 96 aa11.95□□□□□ -0.5
TRAF4-212ENST00000498540 SLC22A2O15244 555 aa11.94□□□□□ -0.5
TRAF4-212ENST00000498540 ANGPTL7O43827 346 aa11.94□□□□□ -0.5
TRAF4-212ENST00000498540 FBXO24O75426 580 aa11.94□□□□□ -0.5
TRAF4-212ENST00000498540 ANXA2P07355 339 aaKnown RBP11.94□□□□□ -0.5
TRAF4-212ENST00000498540 CD28P10747 220 aa11.94□□□□□ -0.5
TRAF4-212ENST00000498540 COX4I1P13073 169 aa11.94□□□□□ -0.5
TRAF4-212ENST00000498540 ENTPD1P49961 510 aa11.94□□□□□ -0.5
TRAF4-212ENST00000498540 HABP2Q14520 560 aaPredicted RBP11.94□□□□□ -0.5
TRAF4-212ENST00000498540 ZNF511Q8NB15 262 aa11.94□□□□□ -0.5
TRAF4-212ENST00000498540 OR4S1Q8NGB4 309 aa11.94□□□□□ -0.5
TRAF4-212ENST00000498540 RPL3LQ92901 407 aaKnown RBP11.94□□□□□ -0.5
TRAF4-212ENST00000498540 HOPXQ9BPY8 73 aaPredicted RBP11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms