RNA–Protein interactions for RNA: ENST00000498280.1

RBM39-242, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 444 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-242ENST00000498280 CLDN18P56856 261 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 IFITM3Q01628 133 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 DNAJC3Q13217 504 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 C5orf64Q2M2E5 130 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 C6orf99Q4VX62 202 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 PRR9Q5T870 116 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 KDM4DQ6B0I6 523 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 TTC19Q6DKK2 380 aaPredicted RBP1.24□□□□□ -2.21
RBM39-242ENST00000498280 OR2T5Q6IEZ7 315 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 RWDD4Q6NW29 188 aaKnown RBP1.24□□□□□ -2.21
RBM39-242ENST00000498280 GUSBP11Q6P575 273 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 ANGPTL8Q6UXH0 198 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 LYPD1Q8N2G4 141 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 DRAM1Q8N682 238 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 MIR7-3HGQ8N6C7 128 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 ST20-AS1Q8NBB2 130 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 OR2T29Q8NH02 315 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 ASZ1Q8WWH4 475 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 CDS1Q92903 461 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 ISOC2Q96AB3 205 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 WDR34Q96EX3 536 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 CERS2Q96G23 380 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 UBE2E2Q96LR5 201 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 ZFP3Q96NJ6 502 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 KCNS3Q9BQ31 491 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 AGMATQ9BSE5 352 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 MARVELD1Q9BSK0 173 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 ANP32EQ9BTT0 268 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 CHCHD7Q9BUK0 85 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 DEFB129Q9H1M3 183 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 DHX35Q9H5Z1 703 aaKnown RBP1.24□□□□□ -2.21
RBM39-242ENST00000498280 CRLF2Q9HC73 371 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 CD209Q9NNX6 404 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 LRRC42Q9Y546 428 aa1.24□□□□□ -2.21
RBM39-242ENST00000498280 ARPC4-TTLL3A0A0A6YYG9 625 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 A0A1B0GUH1 482 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 GOLGA6L7A0A1B0GV03 622 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 SLC22A20A6NK97 555 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 MANBAO00462 879 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 CASC3O15234 703 aaKnown RBP1.23□□□□□ -2.21
RBM39-242ENST00000498280 CHMP2AO43633 222 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 HSBP1O75506 76 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 RPN2P04844 631 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 CD28P10747 220 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 HSPD1P10809 573 aaKnown RBP1.23□□□□□ -2.21
RBM39-242ENST00000498280 PMCHP20382 165 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 PRKACBP22694 351 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 GABRR2P28476 465 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 APLNRP35414 380 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 CCT6AP40227 531 aaKnown RBP1.23□□□□□ -2.21
RBM39-242ENST00000498280 OR2B8PP59922 312 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 PAFAH1B2P68402 229 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 ELF3P78545 371 aaPredicted RBP1.23□□□□□ -2.21
RBM39-242ENST00000498280 LCN2P80188 198 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 FUT5Q11128 374 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 NAB1Q13506 487 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 DOC2AQ14183 400 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 OR1Q1Q15612 314 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 FAM222AQ5U5X8 452 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 TMEM236Q5W0B7 351 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 TMPRSS11AQ6ZMR5 421 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 Q6ZSR6 202 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 LINC00336Q6ZUF6 198 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 MRPL21Q7Z2W9 205 aaKnown RBP1.23□□□□□ -2.21
RBM39-242ENST00000498280 ERO1BQ86YB8 467 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 SLC30A8Q8IWU4 369 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 STK40Q8N2I9 435 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 SLC35G3Q8N808 338 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 PROKR2Q8NFJ6 384 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 OR1L1Q8NH94 360 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 DCAKDQ8WVC6 231 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 PIH1D2Q8WWB5 315 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 RXFP2Q8WXD0 754 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 NAT6Q93015 286 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 KIAA1143Q96AT1 154 aaPredicted RBP1.23□□□□□ -2.21
RBM39-242ENST00000498280 ISG20Q96AZ6 181 aaKnown RBP1.23□□□□□ -2.21
RBM39-242ENST00000498280 TMEM159Q96B96 161 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 RCN3Q96D15 328 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 FAM19A4Q96LR4 140 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 IP6K3Q96PC2 410 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 CSPG4P5Q96PW8 444 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 TEAD3Q99594 435 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 RHOXF2Q9BQY4 288 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 BLZF1Q9H2G9 400 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 CLSTN2Q9H4D0 955 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 ZSCAN16Q9H4T2 348 aaPredicted RBP1.23□□□□□ -2.21
RBM39-242ENST00000498280 REEP1Q9H902 201 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 CYP3A43Q9HB55 503 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 RPRD1BQ9NQG5 326 aaKnown RBP1.23□□□□□ -2.21
RBM39-242ENST00000498280 TMEM100Q9NV29 134 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 ZMAT5Q9UDW3 170 aaKnown RBP1.23□□□□□ -2.21
RBM39-242ENST00000498280 PSME2Q9UL46 239 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 SIGLEC7Q9Y286 467 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 ANKRD12Q6UB98 2062 aa1.23□□□□□ -2.21
RBM39-242ENST00000498280 SCN1AP35498 2009 aa1.22□□□□□ -2.21
RBM39-242ENST00000498280 A0A0B4J2E0 115 aa1.22□□□□□ -2.21
RBM39-242ENST00000498280 CCL15-CCL14A0A0B4J2E2 113 aa1.22□□□□□ -2.21
RBM39-242ENST00000498280 LOC100653049A0A140TA62 436 aa1.22□□□□□ -2.21
RBM39-242ENST00000498280 ZNF233A6NK53 670 aa1.22□□□□□ -2.21
RBM39-242ENST00000498280 ZNF98A6NK75 572 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms