RNA–Protein interactions for RNA: ENST00000497984.5

SMC4-227, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-227ENST00000497984 ERFP50548 548 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 KRTAP12-1P59990 96 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 PYDC2Q56P42 97 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 ARMC12Q5T9G4 340 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 LRRC66Q68CR7 880 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 MORN3Q6PF18 240 aaPredicted RBP1.21□□□□□ -2.22
SMC4-227ENST00000497984 Q6ZSR6 202 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 HORMAD1Q86X24 394 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 TTC29Q8NA56 475 aaPredicted RBP1.21□□□□□ -2.22
SMC4-227ENST00000497984 LRRC75AQ8NAA5 344 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 CDS1Q92903 461 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 SGTBQ96EQ0 304 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 PANX1Q96RD7 426 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 C20orf24Q9BUV8 137 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 ABCG5Q9H222 651 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 MRM3Q9HC36 420 aaKnown RBP1.21□□□□□ -2.22
SMC4-227ENST00000497984 ACP6Q9NPH0 428 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 NLE1Q9NVX2 485 aaPredicted RBP1.21□□□□□ -2.22
SMC4-227ENST00000497984 PLXNB1O43157 2135 aa1.21□□□□□ -2.22
SMC4-227ENST00000497984 IGLV10-54A0A075B6I4 117 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 ISPDA4D126 451 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 M0R1X1 148 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 GABRPO00591 440 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 NME4O00746 187 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 OR2F2O95006 317 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 MYCNOSP40205 109 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 KRTAP21-3Q3LHN1 58 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 ZNF678Q5SXM1 525 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 MRPL2Q5T653 305 aaKnown RBP1.2□□□□□ -2.22
SMC4-227ENST00000497984 CPTPQ5TA50 214 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 LINC00469Q8N7U9 141 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 ZNF420Q8TAQ5 688 aaPredicted RBP1.2□□□□□ -2.22
SMC4-227ENST00000497984 NRGNQ92686 78 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 TMEM159Q96B96 161 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 C8orf44Q96CB5 159 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 PRRC1Q96M27 445 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 GPR21Q99679 349 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 CCDC77Q9BR77 488 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 SFXN3Q9BWM7 321 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 CALN1Q9BXU9 219 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 ZNF160Q9HCG1 818 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 INIPQ9NRY2 104 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 SAR1BQ9Y6B6 198 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 NINLQ9Y2I6 1382 aa1.2□□□□□ -2.22
SMC4-227ENST00000497984 THADAQ6YHU6 1953 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 A0A0A6YYD5 115 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 CCL15-CCL14A0A0B4J2E2 113 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 SLC16A7O60669 478 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 CPSF4O95639 269 aaKnown RBP1.19□□□□□ -2.22
SMC4-227ENST00000497984 TGM6O95932 706 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 TRBV12-3P01733 135 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 IGHG2P01859 326 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 PTMSP20962 102 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 GTF2E2P29084 291 aaKnown RBP1.19□□□□□ -2.22
SMC4-227ENST00000497984 OR12D2P58182 307 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 PPP1CAP62136 330 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 CCL15Q16663 113 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 HADHQ16836 314 aaKnown RBP1.19□□□□□ -2.22
SMC4-227ENST00000497984 CARD17Q5XLA6 110 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 TMEM220Q6QAJ8 160 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 SCD5Q86SK9 330 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 BBS7Q8IWZ6 715 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 RNF10Q8N5U6 811 aaKnown RBP1.19□□□□□ -2.22
SMC4-227ENST00000497984 OR4M2Q8NGB6 313 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 RPEQ96AT9 228 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 OR2V2Q96R30 315 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 UQCC2Q9BRT2 126 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 UCK2Q9BZX2 261 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 SLC7A5P2Q9GIP4 190 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 TMEM185BQ9H7F4 350 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 TREX1Q9NSU2 369 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 SLC22A7Q9Y694 548 aa1.19□□□□□ -2.22
SMC4-227ENST00000497984 UBN2Q6ZU65 1347 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 TSPAN11A1L157 253 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 ANKRD65E5RJM6 399 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 PSPHP1O15172 72 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 ERLIN1O75477 346 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 KCNK2O95069 426 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 KRT14P02533 472 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 STOMP27105 288 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 PRSS3P35030 304 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 UQCRFS1P47985 274 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 RAB7AP51149 207 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 RPS15P62841 145 aaKnown RBP1.18□□□□□ -2.22
SMC4-227ENST00000497984 SLC9A3R2Q15599 337 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 ZNF141Q15928 474 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 CCDC183Q5T5S1 534 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 FAM131AQ6UXB0 335 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 WDR82Q6UXN9 313 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 FAM43BQ6ZT52 329 aaPredicted RBP1.18□□□□□ -2.22
SMC4-227ENST00000497984 OR56A4Q8NGH8 313 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 OR4C13Q8NGP0 309 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 OR5AR1Q8NGP9 310 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 SFXN5Q8TD22 340 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 S100PBPQ96BU1 408 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 DYNLL2Q96FJ2 89 aa1.18□□□□□ -2.22
SMC4-227ENST00000497984 LYARQ9NX58 379 aaKnown RBP1.18□□□□□ -2.22
SMC4-227ENST00000497984 RCL1Q9Y2P8 373 aaKnown RBP1.18□□□□□ -2.22
SMC4-227ENST00000497984 BAZ2AQ9UIF9 1905 aaKnown RBP1.17□□□□□ -2.22
SMC4-227ENST00000497984 BAHCC1Q9P281 2608 aa1.17□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms