RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 IL4P05112 153 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 ZNF806P0C7X5 589 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 STAG3L2P0CL84 134 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 APLNRP35414 380 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 POLR2IP36954 125 aaKnown RBP2.37□□□□□ -2.03
SMC4-225ENST00000497203 CFHR2P36980 270 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 KIR3DL2P43630 455 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 PITPNAQ00169 270 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 ZNF816Q0VGE8 651 aaPredicted RBP2.37□□□□□ -2.03
SMC4-225ENST00000497203 OR1Q1Q15612 314 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 OPN5Q6U736 354 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 ERO1BQ86YB8 467 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 ARHGAP18Q8N392 663 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 LINC00469Q8N7U9 141 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 OR4M1Q8NGD0 313 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 OR1S1Q8NH92 325 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 ENKURQ8TC29 256 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 C17orf50Q8WW18 174 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 CDS1Q92903 461 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 CIDECQ96AQ7 238 aaPredicted RBP2.37□□□□□ -2.03
SMC4-225ENST00000497203 RNF5Q99942 180 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 GAL3ST2Q9H3Q3 398 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 KIR3DX1Q9H7L2 352 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 WFDC1Q9HC57 220 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 GGA2Q9UJY4 613 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 FLVCR2Q9UPI3 526 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 ZNF257Q9Y2Q1 563 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 AQRO60306 1485 aaKnown RBP eCLIP2.37□□□□□ -2.03
SMC4-225ENST00000497203 SCN1AP35498 2009 aa2.37□□□□□ -2.03
SMC4-225ENST00000497203 SBNO1A3KN83 1393 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 C2orf16Q68DN1 1984 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 TNS2Q63HR2 1409 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 TUBGCP6Q96RT7 1819 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 ARPC4-TTLL3A0A0A6YYG9 625 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 IGHV3-72A0A0B4J1Y9 119 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 A0A0B4J2E0 115 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 LOC100653049A0A140TA62 436 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 C5orf63A6NC05 138 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 MANBAO00462 879 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 MYL12BO14950 172 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 PLIN3O60664 434 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 KRT34O76011 436 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 MPZL1O95297 269 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 TTC4O95801 387 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 TGM6O95932 706 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 HSPD1P10809 573 aaKnown RBP2.36□□□□□ -2.03
SMC4-225ENST00000497203 THRAP10827 490 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 IVDP26440 423 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 CCNG1P51959 295 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 C2orf54Q08AI8 447 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 CDC20Q12834 499 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 HNRNPA1L2Q32P51 320 aaKnown RBP2.36□□□□□ -2.03
SMC4-225ENST00000497203 TEX30Q5JUR7 227 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 MFSD14CQ5VZR4 134 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 THOC7Q6I9Y2 204 aaKnown RBP2.36□□□□□ -2.03
SMC4-225ENST00000497203 DAW1Q8N136 415 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 WDR31Q8NA23 367 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 GATSQ8NAP1 163 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 OR51L1Q8NGJ5 315 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 OR13G1Q8NGZ3 307 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 OR1L1Q8NH94 360 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 CIRBP-AS1Q8TBR5 109 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 DCAKDQ8WVC6 231 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 ESR2Q92731 530 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 TOP1MTQ969P6 601 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 FAM131CQ96AQ9 280 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 NEURL3Q96EH8 262 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 KCNS1Q96KK3 526 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 SULT4A1Q9BR01 284 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 CHCHD7Q9BUK0 85 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 SFXN3Q9BWM7 321 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 LCE3DQ9BYE3 92 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 ZNF442Q9H7R0 627 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 KPTNQ9Y664 436 aa2.36□□□□□ -2.03
SMC4-225ENST00000497203 BRCA1P38398 1863 aaKnown RBP2.36□□□□□ -2.03
SMC4-225ENST00000497203 TSPOAP1O95153 1857 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 IGKV1-27A0A075B6S5 117 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 IGHV3-49A0A0A0MS15 119 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 ZNF850A8MQ14 1090 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 LINC01619G3V211 115 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 DFFAO00273 331 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 PSPHP1O15172 72 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 RRP8O43159 456 aaKnown RBP2.35□□□□□ -2.03
SMC4-225ENST00000497203 SERPINB7O75635 380 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 RCBTB2O95199 551 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 GCGP01275 180 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 IGLV3-25P01717 112 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 HLA-DQB1P01920 261 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 SLC35G6P0C7Q6 338 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 LOXP28300 417 aaPredicted RBP2.35□□□□□ -2.03
SMC4-225ENST00000497203 TAS2R60P59551 318 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 STEAP4Q687X5 459 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 Q6ZSR6 202 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 OR13C9Q8NGT0 318 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 RTN4IP1Q8WWV3 396 aaPredicted RBP2.35□□□□□ -2.03
SMC4-225ENST00000497203 BAALCQ8WXS3 180 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 OR8D1Q8WZ84 308 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 OR4K3Q96R72 315 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 OSBPL11Q9BXB4 747 aa2.35□□□□□ -2.03
SMC4-225ENST00000497203 FBXO8Q9NRD0 319 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms