RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 PRPF19Q9UMS4 504 aaKnown RBP3.05□□□□□ -1.92
MDM2-220ENST00000496959 C15orf41Q9Y2V0 281 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 TACC2O95359 2948 aa3.05□□□□□ -1.92
MDM2-220ENST00000496959 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.04□□□□□ -1.921e-7■■■■□ 19.4
MDM2-220ENST00000496959 USF3Q68DE3 2245 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 KIAA1549Q9HCM3 1950 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 IGLV4-60A0A075B6I1 120 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 LRCOL1A6NCL2 159 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 KRT87PA6NCN2 255 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 K7N7A8 449 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 CDC7O00311 574 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 ERI3O43414 337 aaKnown RBP3.04□□□□□ -1.92
MDM2-220ENST00000496959 CD5LO43866 347 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 TRAPPC6AO75865 159 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 SCELO95171 688 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 STATHP02808 62 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 CSF3P09919 207 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 SMIM10L1P0DMW3 83 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 CCL3P10147 92 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 POU2F1P14859 743 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 TSPAN8P19075 237 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 AQP1P29972 269 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 RPL22P35268 128 aaKnown RBP3.04□□□□□ -1.92
MDM2-220ENST00000496959 CD79BP40259 229 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 ATP5J2P56134 94 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 RAB8AP61006 207 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 BTN3A2P78410 334 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 BTG2P78543 158 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 MRPS22P82650 360 aaKnown RBP3.04□□□□□ -1.92
MDM2-220ENST00000496959 SCGB2A2Q13296 93 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 CUL1Q13616 776 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 NRF1Q16656 503 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 ADPRMQ3LIE5 342 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 CDKL4Q5MAI5 379 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 LIPNQ5VXI9 398 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 PVRIGQ6DKI7 326 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 TMIGD1Q6UXZ0 262 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 CENPUQ71F23 418 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 KIAA1328Q86T90 577 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 ZNF429Q86V71 674 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 GRAMD2AQ8IUY3 354 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 CPNE9Q8IYJ1 553 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 ST13P4Q8IZP2 240 aaPredicted RBP3.04□□□□□ -1.92
MDM2-220ENST00000496959 BBOF1Q8ND07 529 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 OR1J4Q8NGS1 313 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 LINC01560Q8TB33 94 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 MS4A6EQ96DS6 147 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 SMIM10Q96HG1 83 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 CAPZA3Q96KX2 299 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 JSRP1Q96MG2 331 aaPredicted RBP3.04□□□□□ -1.92
MDM2-220ENST00000496959 FAM111AQ96PZ2 611 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 CHP1Q99653 195 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 GPR21Q99679 349 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 NAT9Q9BTE0 207 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 TBCDQ9BTW9 1192 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 EFCAB11Q9BUY7 163 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 CHIAQ9BZP6 476 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 STMN4Q9H169 189 aaPredicted RBP3.04□□□□□ -1.92
MDM2-220ENST00000496959 METTL7AQ9H8H3 244 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 NECAP2Q9NVZ3 263 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 PAQR5Q9NXK6 330 aaPredicted RBP3.04□□□□□ -1.92
MDM2-220ENST00000496959 RIMS3Q9UJD0 308 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 CHCHD2Q9Y6H1 151 aaPredicted RBP3.04□□□□□ -1.92
MDM2-220ENST00000496959 TEX264Q9Y6I9 313 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 ROS1P08922 2347 aa3.04□□□□□ -1.92
MDM2-220ENST00000496959 FREM1Q5H8C1 2179 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 A0A0G2JMM0 328 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 A0A1W2PPB8 328 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 A0A1W2PRS3 328 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 TRIM64A6NGJ6 449 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 TRIM64BA6NI03 449 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 SLC22A20A6NK97 555 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 KIR3DP1A8MWS1 328 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 DEFB108AA8MXU0 73 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 ACOX3O15254 700 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 C1GALT1C1LP0DN25 315 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 HIST1H1TP22492 207 aaPredicted RBP3.03□□□□□ -1.92
MDM2-220ENST00000496959 UGT2B10P36537 528 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 SLC1A2P43004 574 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 SSR2P43308 183 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 MAGEA6P43360 314 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 CRADDP78560 199 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 TNFRSF17Q02223 184 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 ASPHQ12797 758 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 GANABQ14697 944 aaKnown RBP3.03□□□□□ -1.92
MDM2-220ENST00000496959 EBPQ15125 230 aaKnown RBP3.03□□□□□ -1.92
MDM2-220ENST00000496959 PTGES3Q15185 160 aaKnown RBP3.03□□□□□ -1.92
MDM2-220ENST00000496959 BCL2A1Q16548 175 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 CLEC12BQ2HXU8 276 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 PRAMEF20Q5VT98 475 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 FAM45BPQ6NSW5 357 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 CYHR1Q6ZMK1 362 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 RNF165Q6ZSG1 346 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 FAM220AQ7Z4H9 259 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 LUZP2Q86TE4 346 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 THOC6Q86W42 341 aaKnown RBP3.03□□□□□ -1.92
MDM2-220ENST00000496959 CNTN4Q8IWV2 1026 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 RNF10Q8N5U6 811 aaKnown RBP3.03□□□□□ -1.92
MDM2-220ENST00000496959 OR7G1Q8NGA0 311 aa3.03□□□□□ -1.92
MDM2-220ENST00000496959 OR10G3Q8NGC4 313 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms