RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 F2RL2O00254 374 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 SHBGP04278 402 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 MMP11P24347 488 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 SUMO2P61956 95 aaKnown RBP5.32□□□□□ -1.56
USF3-204ENST00000496826 UFM1P61960 85 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 ACKR1Q16570 336 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 HFEQ30201 348 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 LCN10Q6JVE6 187 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 CDRT4Q8N9R6 151 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 OR52N4Q8NGI2 321 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 TMIGD2Q96BF3 282 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 CHST6Q9GZX3 395 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 NHP2Q9NX24 153 aaKnown RBP5.32□□□□□ -1.56
USF3-204ENST00000496826 SLC25A15Q9Y619 301 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 CDC42BPBQ9Y5S2 1711 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 LYRM1O43325 122 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 HCRTR1O43613 425 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 CTSVO60911 334 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 FCGR3BO75015 233 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 SLC35E2BP0CK96 405 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 LIPAP38571 399 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 ROM1Q03395 351 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 RHBDD1Q8TEB9 315 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 PDLIM2Q96JY6 352 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 PBOV1Q9GZY1 135 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 LY9Q9HBG7 655 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 NDUFB11Q9NX14 153 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 KLF12Q9Y4X4 402 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 DNMBPQ6XZF7 1577 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 CNTNAP1P78357 1384 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 C7orf66A4D0T2 115 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 F12P00748 615 aaPredicted RBP5.32□□□□□ -1.56
USF3-204ENST00000496826 KCNA6P17658 529 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 WNT5AP41221 380 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 TRA2BP62995 288 aaKnown RBP5.32□□□□□ -1.56
USF3-204ENST00000496826 SPANXN1Q5VSR9 72 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 ZNF324BQ6AW86 544 aaPredicted RBP5.32□□□□□ -1.56
USF3-204ENST00000496826 SEZ6L2Q6UXD5 910 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 DUSP18Q8NEJ0 188 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 OR13A1Q8NGR1 328 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 OR51E1Q8TCB6 317 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 PHYHIPLQ96FC7 376 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 NMUR1Q9HB89 426 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 AQP7P3A6NL99 342 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 HSD17B6O14756 317 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 CD5LO43866 347 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 HMGCLP35914 325 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 MAT1AQ00266 395 aaKnown RBP5.32□□□□□ -1.56
USF3-204ENST00000496826 OR1Q1Q15612 314 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 ZNF770Q6IQ21 691 aaPredicted RBP5.32□□□□□ -1.56
USF3-204ENST00000496826 OR5AK3PQ8NH89 298 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 PARP12Q9H0J9 701 aaKnown RBP5.32□□□□□ -1.56
USF3-204ENST00000496826 ZNF446Q9NWS9 450 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 PROCRQ9UNN8 238 aa5.32□□□□□ -1.56
USF3-204ENST00000496826 LACTBL1A8MY62 500 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 CTDSPLO15194 276 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 MT-ND6P03923 174 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 ATP1B1P05026 303 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 ITGB7P26010 798 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 SEMG2Q02383 582 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 PMS2CLQ68D20 193 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 ZNF787Q6DD87 383 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 FAM57BQ71RH2 274 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 UBE2DNLQ8IWF7 75 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 PPP1R1CQ8WVI7 109 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 PTP4A1Q93096 173 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 IGSF8Q969P0 613 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 ABHD1Q96SE0 405 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 SLC46A2Q9BY10 475 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 ZNF487B1APH4 448 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 FAM157AC9JC47 383 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 H3BMH7 237 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 GPR31O00270 319 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 FAM3BP58499 235 aaPredicted RBP5.31□□□□□ -1.56
USF3-204ENST00000496826 SNRPEP62304 92 aaKnown RBP5.31□□□□□ -1.56
USF3-204ENST00000496826 SEC11AP67812 179 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 EMX2Q04743 252 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 TARBP2Q15633 366 aaKnown RBP5.31□□□□□ -1.56
USF3-204ENST00000496826 C6orf132Q5T0Z8 1188 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 MRPL54Q6P161 138 aaKnown RBP5.31□□□□□ -1.56
USF3-204ENST00000496826 HTR3DQ70Z44 454 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 MRGPREQ86SM8 312 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 MOB3BQ86TA1 216 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 RNF113BQ8IZP6 322 aaKnown RBP5.31□□□□□ -1.56
USF3-204ENST00000496826 FAM110BQ8TC76 370 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 MAP1LC3B2A6NCE7 125 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 P01737 135 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 SNRPD3P62318 126 aaKnown RBP5.31□□□□□ -1.56
USF3-204ENST00000496826 BST1Q10588 318 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 OR51F2Q8NH61 342 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 RBPMSQ93062 196 aaKnown RBP5.31□□□□□ -1.56
USF3-204ENST00000496826 RMI2Q96E14 147 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 PELI1Q96FA3 418 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 PDXPQ96GD0 296 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 RNF185Q96GF1 192 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 MAP1LC3BQ9GZQ8 125 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 HDGFL3Q9Y3E1 203 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 CHST2Q9Y4C5 530 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 HMGXB3Q12766 1538 aa5.31□□□□□ -1.56
USF3-204ENST00000496826 DNAJC13O75165 2243 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms