RNA–Protein interactions for RNA: ENST00000496549.5

CRNKL1-205, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,093 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-205ENST00000496549 TBPL1P62380 186 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 CXCL9Q07325 125 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 IHHQ14623 411 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 MPV17LQ2QL34 196 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 ZNF750Q32MQ0 723 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 AADACL3Q5VUY0 350 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 SAMD7Q7Z3H4 446 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 MTURNQ8N3F0 131 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 GBGT1Q8N5D6 347 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 OR4D11Q8NGI4 311 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 ABHD3Q8WU67 409 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 ANKRD9Q96BM1 317 aaPredicted RBP7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 ZDHHC11Q9H8X9 412 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 SLC2A8Q9NY64 477 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 B3GAT1Q9P2W7 334 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 B3GALT5Q9Y2C3 310 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 NTNG1Q9Y2I2 539 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 SPACA6W5XKT8 324 aa7.36□□□□□ -1.23
CRNKL1-205ENST00000496549 C1QTNF3-AMACRE9PGA6 284 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 CD1AP06126 327 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 P2RY1P47900 373 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 PRLHRP49683 370 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 HSD11B2P80365 405 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 SRSF4Q08170 494 aaKnown RBP7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 TMEM184AQ6ZMB5 413 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 SLC39A11Q8N1S5 342 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 ARSGQ96EG1 525 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 SYT3Q9BQG1 590 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 FAM103A1Q9BTL3 118 aaKnown RBP7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 LRFN3Q9BTN0 628 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 KIR3DX1Q9H7L2 352 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 TAAR2Q9P1P5 351 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 KCNK6Q9Y257 313 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 YBX2Q9Y2T7 364 aaKnown RBP7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 FCF1Q9Y324 198 aaKnown RBP7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 ANKRD31Q8N7Z5 1873 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 FPR2P25090 351 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 PRPS1P60891 318 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 SNRPD1P62314 119 aaKnown RBP7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 TMEM268Q5VZI3 342 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 GKN2Q86XP6 184 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 PTPN18Q99952 460 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 CYTL1Q9NRR1 136 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 QSER1Q2KHR3 1735 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 FIGNL2A6NMB9 653 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 ETHE1O95571 254 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 FUT3P21217 361 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 OMGP23515 440 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 FABP6P51161 128 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 SPATA45Q537H7 98 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 OCIAD2Q56VL3 154 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 Q6ZVU0 165 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 OLIG3Q7RTU3 272 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 APOBEC3FQ8IUX4 373 aaKnown RBP7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 DTWD2Q8NBA8 298 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 SLC38A9Q8NBW4 561 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 EMG1Q92979 244 aaKnown RBP7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 MEGF9Q9H1U4 602 aa7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 SRA1Q9HD15 236 aaKnown RBP7.35□□□□□ -1.23
CRNKL1-205ENST00000496549 CACNA1CQ13936 2221 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 MSTNO14793 375 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 MTX2O75431 263 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 PPBPP02775 128 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 PI3P19957 117 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 MAS1LP35410 378 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 ECI1P42126 302 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 RIPPLY3P57055 190 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 MRPL49Q13405 166 aaKnown RBP7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 SMIM21Q3B7S5 101 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 C7orf61Q8IZ16 206 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 ZNF619Q8N2I2 560 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 MRGPRX3Q96LB0 322 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 PCGF1Q9BSM1 259 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 SPHK2Q9NRA0 654 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 HS3ST3B1Q9Y662 390 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 TRAV30A0A087WSZ9 112 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 ZBTB42B2RXF5 422 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 RPL36A-HNRNPH2H7BZ11 118 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 DDAH2O95865 285 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 TTRP02766 147 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 GNRHRP30968 328 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 PPP1CCP36873 323 aaKnown RBP7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 EMP2P54851 167 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 PPP1CBP62140 327 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 RPS24P62847 133 aaKnown RBP7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 RAE1P78406 368 aaKnown RBP7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 ZNF787Q6DD87 383 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 KIRREL2Q6UWL6 708 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 DPY19L2P2Q6ZN68 376 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 RTN4RL1Q86UN2 441 aaPredicted RBP7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 ZNF440Q8IYI8 595 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 LGI3Q8N145 548 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 C17orf78Q8N4C9 275 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 C2orf73Q8N5S3 287 aaPredicted RBP7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 APCDD1LQ8NCL9 501 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 OR52L2PQ8NGH6 319 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 DIO2Q92813 273 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 RARRES2Q99969 163 aa7.34□□□□□ -1.23
CRNKL1-205ENST00000496549 ALG12Q9BV10 488 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms