RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 RNF148Q8N7C7 305 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 NANOGP1Q8N7R0 232 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 MAPKAPK5-AS1Q8N8E1 139 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 NRACQ8N912 160 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 LRTM2Q8N967 370 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 CLDND2Q8NHS1 167 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 PNPT1Q8TCS8 783 aaKnown RBP3.54□□□□□ -1.84
VPS52-222ENST00000495981 TCP10LQ8TDR4 215 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 GIMAP1Q8WWP7 306 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 YIPF5Q969M3 257 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 MRPL24Q96A35 216 aaKnown RBP3.54□□□□□ -1.84
VPS52-222ENST00000495981 AURKBQ96GD4 344 aaPredicted RBP3.54□□□□□ -1.84
VPS52-222ENST00000495981 PPP1R36Q96LQ0 422 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 SPAG8Q99932 426 aaPredicted RBP3.54□□□□□ -1.84
VPS52-222ENST00000495981 NEURL2Q9BR09 285 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 KRTAP9-3Q9BYQ3 159 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 MRPL37Q9BZE1 423 aaKnown RBP3.54□□□□□ -1.84
VPS52-222ENST00000495981 RIMS4Q9H426 269 aaPredicted RBP3.54□□□□□ -1.84
VPS52-222ENST00000495981 DYNLRB1Q9NP97 96 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 AIG1Q9NVV5 245 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 B3GNT2Q9NY97 397 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 IL20RAQ9UHF4 553 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 BTNL2Q9UIR0 455 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 MYRFQ9Y2G1 1151 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 U3KQV3 271 aa3.54□□□□□ -1.84
VPS52-222ENST00000495981 DNAH10Q8IVF4 4471 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 LOC105371242A0A075B767 164 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 A0A096LPI6 279 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 OR6C65A6NJZ3 312 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 SRRM4A7MD48 611 aaKnown RBP3.53□□□□□ -1.84
VPS52-222ENST00000495981 A8MVM7 634 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 ZNF99A8MXY4 864 aaPredicted RBP3.53□□□□□ -1.84
VPS52-222ENST00000495981 B4DSR2 109 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 SLCO1B7G3V0H7 640 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 SDHDO14521 159 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 AHSA1O95433 338 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 TOMM40O96008 361 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 HPRP00739 348 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 HLA-HP01893 362 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 SERPINE1P05121 402 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 DBIP07108 87 aaKnown RBP3.53□□□□□ -1.84
VPS52-222ENST00000495981 PSG1P11464 419 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 ZNF35P13682 527 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 CBR1P16152 277 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 NPR2P20594 1047 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 CHI3L1P36222 383 aaPredicted RBP3.53□□□□□ -1.84
VPS52-222ENST00000495981 ALDH3B1P43353 468 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 CLDN17P56750 224 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 KRTAP10-3P60369 221 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 UBE2NP61088 152 aaKnown RBP3.53□□□□□ -1.84
VPS52-222ENST00000495981 LMO4P61968 165 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 MRPS11P82912 194 aaKnown RBP3.53□□□□□ -1.84
VPS52-222ENST00000495981 PDZK1IP1Q13113 114 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 HNRNPA0Q13151 305 aaKnown RBP3.53□□□□□ -1.84
VPS52-222ENST00000495981 CHI3L2Q15782 390 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 CEACAM16Q2WEN9 425 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 ANXA8L1Q5VT79 327 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 WBP2NLQ6ICG8 309 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 CD164L2Q6UWJ8 174 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 COLCA1Q6ZS62 124 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 SLC16A9Q7RTY1 509 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 C1QL2Q7Z5L3 287 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 RTN4RL2Q86UN3 420 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 ZNF440Q8IYI8 595 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 SMYD1Q8NB12 490 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 OR4F15Q8NGB8 312 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 OR52B4Q8NGK2 314 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 MFSD8Q8NHS3 518 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 SLC26A7Q8TE54 656 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 AENQ8WTP8 325 aaKnown RBP3.53□□□□□ -1.84
VPS52-222ENST00000495981 GTF3AQ92664 365 aaKnown RBP3.53□□□□□ -1.84
VPS52-222ENST00000495981 SLC41A3Q96GZ6 507 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 C1orf147Q96MC9 270 aaPredicted RBP3.53□□□□□ -1.84
VPS52-222ENST00000495981 DPY30Q9C005 99 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 RAB1BQ9H0U4 201 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 MEAF6Q9HAF1 191 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 LPAR2Q9HBW0 351 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 CRLF2Q9HC73 371 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 SDR39U1Q9NRG7 319 aaPredicted RBP3.53□□□□□ -1.84
VPS52-222ENST00000495981 ZNF275Q9NSD4 429 aaPredicted RBP3.53□□□□□ -1.84
VPS52-222ENST00000495981 P2RX2Q9UBL9 471 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 OPN4Q9UHM6 478 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 STUB1Q9UNE7 303 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 RASD1Q9Y272 281 aa3.53□□□□□ -1.84
VPS52-222ENST00000495981 STAB2Q8WWQ8 2551 aa3.53□□□□□ -1.85
VPS52-222ENST00000495981 IGLV5-37A0A075B6J1 123 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 IGLV3-9A0A075B6K5 115 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 LOC102725191A0A1B0GVB3 256 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 A0A1B0GWA3 101 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 G3V4G9 280 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 PIN1P1O15428 100 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 SYNGR3O43761 229 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 SSX5O60225 188 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 VAMP5O95183 116 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 CPSF4O95639 269 aaKnown RBP3.52□□□□□ -1.85
VPS52-222ENST00000495981 APOHP02749 345 aaPredicted RBP3.52□□□□□ -1.85
VPS52-222ENST00000495981 ADRA2AP08913 450 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 TFPTP0C1Z6 253 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 UQCRBP14927 111 aa3.52□□□□□ -1.85
VPS52-222ENST00000495981 S100A3P33764 101 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms