RNA–Protein interactions for RNA: ENST00000495172.1

GARNL3-219, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-219ENST00000495172 C16orf82Q7Z2V1 217 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 MRPL21Q7Z2W9 205 aaKnown RBP6.8□□□□□ -1.32
GARNL3-219ENST00000495172 FAM71E2Q8N5Q1 922 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 OR1M1Q8NGA1 313 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 PFN4Q8NHR9 129 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 RPL3LQ92901 407 aaKnown RBP6.8□□□□□ -1.32
GARNL3-219ENST00000495172 VPS33AQ96AX1 596 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 EME1Q96AY2 570 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 AKR1E2Q96JD6 320 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 ERP44Q9BS26 406 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 WFDC10AQ9H1F0 79 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 RERGLQ9H628 205 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 YY1AP1Q9H869 796 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 PLEKHA3Q9HB20 300 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 TMEM27Q9HBJ8 222 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 MEPEQ9NQ76 525 aaPredicted RBP6.8□□□□□ -1.32
GARNL3-219ENST00000495172 ZNF229Q9UJW7 825 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 RPS6KA6Q9UK32 745 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 PRDM4Q9UKN5 801 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 KLK5Q9Y337 293 aaPredicted RBP6.8□□□□□ -1.32
GARNL3-219ENST00000495172 IFT52Q9Y366 437 aa6.8□□□□□ -1.32
GARNL3-219ENST00000495172 A0A0G2JPF8 293 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 HTR3EA5X5Y0 456 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 GGT3PA6NGU5 568 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 CPSF4LA6NMK7 179 aaKnown RBP6.79□□□□□ -1.32
GARNL3-219ENST00000495172 CENPBD1B2RD01 187 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 HNRNPCL2B2RXH8 293 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 HNRNPCL3B7ZW38 293 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 F5H5K5 113 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 HNRNPCL1O60812 293 aaKnown RBP6.79□□□□□ -1.32
GARNL3-219ENST00000495172 CHEK2O96017 543 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 LCATP04180 440 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 ALDOCP09972 364 aaKnown RBP6.79□□□□□ -1.32
GARNL3-219ENST00000495172 FAM153BP0C7A2 387 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 ACSM4P0C7M7 580 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 HNRNPCL4P0DMR1 293 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 GUCA1AP43080 201 aaPredicted RBP6.79□□□□□ -1.32
GARNL3-219ENST00000495172 SLC9A3P48764 834 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 NCALDP61601 193 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 SLC35B1P78383 322 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 SNAI3Q3KNW1 292 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 TEX38Q6PEX7 206 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 LINC00322Q6ZN03 302 aaPredicted RBP6.79□□□□□ -1.32
GARNL3-219ENST00000495172 TSEN54Q7Z6J9 526 aaKnown RBP6.79□□□□□ -1.32
GARNL3-219ENST00000495172 RBM45Q8IUH3 476 aaKnown RBP6.79□□□□□ -1.32
GARNL3-219ENST00000495172 GOLGA6L1Q8N7Z2 621 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 OR11H6Q8NGC7 330 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 OR56B2PQ8NGI1 322 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 ZBTB9Q96C00 473 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 MED30Q96HR3 178 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 PANX1Q96RD7 426 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 ARMC7Q9H6L4 198 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 SP140LQ9H930 580 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 RNPEPL1Q9HAU8 725 aa6.79□□□□□ -1.32
GARNL3-219ENST00000495172 FAM172BPA6NC97 362 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 OR2AT4A6NND4 320 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 OR8U8P0C7N1 319 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 PSG2P11465 335 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 GCAP28676 217 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 MDH1P40925 334 aaKnown RBP6.78□□□□□ -1.32
GARNL3-219ENST00000495172 SERPINB9P50453 376 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 TNFRSF9Q07011 255 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 ZNF616Q08AN1 781 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 GPR50Q13585 617 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 KRT71Q3SY84 523 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 CXorf66Q5JRM2 361 aaPredicted RBP6.78□□□□□ -1.32
GARNL3-219ENST00000495172 ANXA8L1Q5VT79 327 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 ZNF662Q6ZS27 426 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 KCTD8Q6ZWB6 473 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 CREG2Q8IUH2 290 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 OR2T27Q8NH04 317 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 LRRC8CQ8TDW0 803 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 TMEM255BQ8WV15 326 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 C12orf43Q96C57 262 aaKnown RBP6.78□□□□□ -1.32
GARNL3-219ENST00000495172 C18orf15Q96N68 181 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 RBP7Q96R05 134 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 KLK15Q9H2R5 256 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 CACYBPQ9HB71 228 aaKnown RBP6.78□□□□□ -1.32
GARNL3-219ENST00000495172 BRD7Q9NPI1 651 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 USE1Q9NZ43 259 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 CALML5Q9NZT1 146 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 ZNF222Q9UK12 451 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 SIRT4Q9Y6E7 314 aaPredicted RBP6.78□□□□□ -1.32
GARNL3-219ENST00000495172 DSCAML1Q8TD84 2053 aa6.78□□□□□ -1.32
GARNL3-219ENST00000495172 C17orf98A8MV24 154 aa6.77□□□□□ -1.33
GARNL3-219ENST00000495172 I3L521 148 aa6.77□□□□□ -1.33
GARNL3-219ENST00000495172 J3QW42 95 aa6.77□□□□□ -1.33
GARNL3-219ENST00000495172 BHLHE40O14503 412 aa6.77□□□□□ -1.33
GARNL3-219ENST00000495172 IL12AP29459 219 aa6.77□□□□□ -1.33
GARNL3-219ENST00000495172 SDHAP31040 664 aa6.77□□□□□ -1.33
GARNL3-219ENST00000495172 ANP32AP39687 249 aaKnown RBP6.77□□□□□ -1.33
GARNL3-219ENST00000495172 DNAJB13P59910 316 aa6.77□□□□□ -1.33
GARNL3-219ENST00000495172 ACTA2P62736 377 aa6.77□□□□□ -1.33
GARNL3-219ENST00000495172 ACTG2P63267 376 aa6.77□□□□□ -1.33
GARNL3-219ENST00000495172 ACTC1P68032 377 aa6.77□□□□□ -1.33
GARNL3-219ENST00000495172 ACTA1P68133 377 aa6.77□□□□□ -1.33
GARNL3-219ENST00000495172 AQP6Q13520 282 aa6.77□□□□□ -1.33
GARNL3-219ENST00000495172 TRIM25Q14258 630 aaKnown RBP6.77□□□□□ -1.33
GARNL3-219ENST00000495172 HNF4GQ14541 408 aa6.77□□□□□ -1.33
GARNL3-219ENST00000495172 GLYATL3Q5SZD4 288 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms