RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 POLR3KQ9Y2Y1 108 aaPredicted RBP14.79□□□□□ -0.04
HDAC4-211ENST00000494800 TRAV38-1A0A0B4J264 116 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 H3BNX3 289 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 EI24O14681 340 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 NDUFA2O43678 99 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 ALPLP05186 524 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 ZFP36P26651 326 aaKnown RBP14.78□□□□□ -0.04
HDAC4-211ENST00000494800 HTR1FP30939 366 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 POLR2IP36954 125 aaKnown RBP14.78□□□□□ -0.04
HDAC4-211ENST00000494800 MAP2K3P46734 347 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 ALDH3A2P51648 485 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 EGR3Q06889 387 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 TMED1Q13445 227 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 BTNL3Q6UXE8 466 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 BOLLQ8N9W6 283 aaKnown RBP14.78□□□□□ -0.04
HDAC4-211ENST00000494800 DEFB108BQ8NET1 73 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 TRUB1Q8WWH5 349 aaKnown RBP14.78□□□□□ -0.04
HDAC4-211ENST00000494800 C9orf16Q9BUW7 83 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 PBOV1Q9GZY1 135 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 OCEL1Q9H607 264 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 FAM206AQ9NX38 181 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 GTF2A1LQ9UNN4 478 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 RHBDD3Q9Y3P4 386 aa14.78□□□□□ -0.04
HDAC4-211ENST00000494800 LOC105371242A0A075B767 164 aa14.77□□□□□ -0.05
HDAC4-211ENST00000494800 LGALS8O00214 317 aa14.77□□□□□ -0.05
HDAC4-211ENST00000494800 MTRF1O75570 445 aaKnown RBP14.77□□□□□ -0.05
HDAC4-211ENST00000494800 CST4P01036 141 aa14.77□□□□□ -0.05
HDAC4-211ENST00000494800 ATP6V1B1P15313 513 aa14.77□□□□□ -0.05
HDAC4-211ENST00000494800 PITPNBP48739 271 aa14.77□□□□□ -0.05
HDAC4-211ENST00000494800 SEC61A1P61619 476 aaKnown RBP14.77□□□□□ -0.05
HDAC4-211ENST00000494800 FAM201AQ5SY85 155 aa14.77□□□□□ -0.05
HDAC4-211ENST00000494800 C1QL2Q7Z5L3 287 aa14.77□□□□□ -0.05
HDAC4-211ENST00000494800 THAP5Q7Z6K1 395 aa14.77□□□□□ -0.05
HDAC4-211ENST00000494800 GALNT4Q8N4A0 578 aa14.77□□□□□ -0.05
HDAC4-211ENST00000494800 TTTY10Q9BZA0 68 aa14.77□□□□□ -0.05
HDAC4-211ENST00000494800 RNPEPL1Q9HAU8 725 aa14.77□□□□□ -0.05
HDAC4-211ENST00000494800 CLN8Q9UBY8 286 aa14.77□□□□□ -0.05
HDAC4-211ENST00000494800 COPS3Q9UNS2 423 aa14.77□□□□□ -0.05
HDAC4-211ENST00000494800 SVEP1Q4LDE5 3571 aa14.77□□□□□ -0.05
HDAC4-211ENST00000494800 ZNF816-ZNF321PA0A0X1KG74 233 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 OOEPA6NGQ2 149 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 TMEM210A6NLX4 147 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 SNTNA6NMZ2 147 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 ZNF850A8MQ14 1090 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 LOC110117498-PIK3R3F6TDL0 507 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 KRT8P05787 483 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 OR2T7P0C7T2 308 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 NPY4RP50391 375 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 ZNF154Q13106 437 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 PRDX4Q13162 271 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 BCL2L15Q5TBC7 163 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 SFRP4Q6FHJ7 346 aaPredicted RBP14.76□□□□□ -0.05
HDAC4-211ENST00000494800 KCTD8Q6ZWB6 473 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 ZDHHC23Q8IYP9 409 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 CBR4Q8N4T8 237 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 SEMA6DQ8NFY4 1073 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 OR1M1Q8NGA1 313 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 OR2T27Q8NH04 317 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 ZNF418Q8TF45 676 aaPredicted RBP14.76□□□□□ -0.05
HDAC4-211ENST00000494800 PIGCQ92535 297 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 STMN2Q93045 179 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 S100A14Q9HCY8 104 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 NUFIP1Q9UHK0 495 aaKnown RBP14.76□□□□□ -0.05
HDAC4-211ENST00000494800 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.76□□□□□ -0.05
HDAC4-211ENST00000494800 AUP1Q9Y679 476 aa14.76□□□□□ -0.05
HDAC4-211ENST00000494800 A0A0A6YYJ9 748 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 C3orf80F5H4A9 247 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 ZNF12P17014 697 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 EPHA1P21709 976 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 ACKR3P25106 362 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 CD80P33681 288 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 RIPPLY1Q0D2K3 151 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 ARMCX4Q5H9R4 360 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 MEDAGQ5VYS4 303 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 ZNF826PQ6ZT77 177 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 C19orf18Q8NEA5 215 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 OR10H4Q8NGA5 316 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 SPATA3Q8NHX4 192 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 ITPKCQ96DU7 683 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 HRASLS5Q96KN8 279 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 LYZL4Q96KX0 146 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 APOL4Q9BPW4 351 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 MMP26Q9NRE1 261 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 ERVK-18Q9QC07 812 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 INSIG2Q9Y5U4 225 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 SNX5Q9Y5X3 404 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 R4GMQ9 66 aa14.75□□□□□ -0.05
HDAC4-211ENST00000494800 TRAPPC2LH3BP13 241 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 AVPP01185 164 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 ADRA2CP18825 462 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 FPR2P25090 351 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 MICBQ29980 383 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 ZBTB37Q5TC79 503 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 CD276Q5ZPR3 534 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 GCSAMQ8N6F7 178 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 YIPF7Q8N8F6 280 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 OR51E1Q8TCB6 317 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 LRRC29Q8WV35 223 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 OR5P3Q8WZ94 311 aa14.74□□□□□ -0.05
HDAC4-211ENST00000494800 EME1Q96AY2 570 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms