RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 CLPXO76031 633 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 ECDO95905 644 aaPredicted RBP10.39□□□□□ -0.75
SKA1-205ENST00000494518 SPI1P17947 270 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 FMO3P31513 532 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 FAM3AP98173 230 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 MZT1Q08AG7 82 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 EIF2B1Q14232 305 aaKnown RBP10.39□□□□□ -0.75
SKA1-205ENST00000494518 OCLNQ16625 522 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 OR1M1Q8NGA1 313 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 H1FXQ92522 213 aaKnown RBP10.39□□□□□ -0.75
SKA1-205ENST00000494518 SGK3Q96BR1 496 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 PAPOLGQ9BWT3 736 aaKnown RBP10.39□□□□□ -0.75
SKA1-205ENST00000494518 TSSK6Q9BXA6 273 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 MED20Q9H944 212 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 IL1RAPQ9NPH3 570 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 ARMC1Q9NVT9 282 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 KAAG1Q9UBP8 84 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 LYVE1Q9Y5Y7 322 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 KPTNQ9Y664 436 aa10.39□□□□□ -0.75
SKA1-205ENST00000494518 A0A0G2JK05 382 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 A0A1B0GVI7 797 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 RNASEK-C17orf49H0YIS7 233 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 CDIPTO14735 213 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 GASTP01350 101 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 HSD17B1P14061 328 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 AMY2BP19961 511 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 HSD11B1P28845 292 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 PRDX6P30041 224 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 GRK5P34947 590 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 ZNF121P58317 390 aaPredicted RBP10.38□□□□□ -0.75
SKA1-205ENST00000494518 RPL15P61313 204 aaKnown RBP10.38□□□□□ -0.75
SKA1-205ENST00000494518 EGR3Q06889 387 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 KLHL12Q53G59 568 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 HSP90B2PQ58FF3 399 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 CYP2R1Q6VVX0 501 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 GDPGP1Q6ZNW5 385 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 LIAT1Q6ZQX7 453 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 ERI1Q8IV48 349 aaKnown RBP10.38□□□□□ -0.75
SKA1-205ENST00000494518 ZSCAN4Q8NAM6 433 aaPredicted RBP10.38□□□□□ -0.75
SKA1-205ENST00000494518 AQP11Q8NBQ7 271 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 OR6N2Q8NGY6 317 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 RPL3LQ92901 407 aaKnown RBP10.38□□□□□ -0.75
SKA1-205ENST00000494518 SPSB4Q96A44 273 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 OTULINQ96BN8 352 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 CDRT15Q96T59 188 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 AMELYQ99218 206 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 WDR13Q9H1Z4 485 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 DPAGT1Q9H3H5 408 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 OPA3Q9H6K4 179 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 VNN3Q9NY84 501 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 ZNRD1Q9P1U0 126 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 ZNF319Q9P2F9 582 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 CD300AQ9UGN4 299 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 RHBDD3Q9Y3P4 386 aa10.38□□□□□ -0.75
SKA1-205ENST00000494518 ZNF816-ZNF321PA0A0X1KG74 233 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 hCG_38984A0A1B0GV85 526 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 MEIOCA2RUB1 952 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 BTBD17A6NE02 478 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 FAM183AA6NL82 134 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 NPFFO15130 113 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 NDUFB3O43676 98 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 CCNB2O95067 398 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 FBP1P09467 338 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 MUC1P15941 1255 aaPredicted RBP10.37□□□□□ -0.75
SKA1-205ENST00000494518 ATP6V1B2P21281 511 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 GNALP38405 381 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 GSK3AP49840 483 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 SAMD4BQ5PRF9 694 aaKnown RBP10.37□□□□□ -0.75
SKA1-205ENST00000494518 RPL13AP3Q6NVV1 102 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 RASSF6Q6ZTQ3 369 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 SLC36A1Q7Z2H8 476 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 CMTM4Q8IZR5 234 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 IQCF1Q8N6M8 205 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 Q8N7P7 452 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 LY6G5BQ8NDX9 201 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 LRTOMTQ8WZ04 291 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 PGAM5Q96HS1 289 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 NMNAT2Q9BZQ4 307 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 RNPEPL1Q9HAU8 725 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 ELL3Q9HB65 397 aaPredicted RBP10.37□□□□□ -0.75
SKA1-205ENST00000494518 TAS2R1Q9NYW7 299 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 IL20Q9NYY1 176 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 ZNF391Q9UJN7 358 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 VPREB3Q9UKI3 123 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 PRPF19Q9UMS4 504 aaKnown RBP10.37□□□□□ -0.75
SKA1-205ENST00000494518 SIGLEC9Q9Y336 463 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 U3KQV3 271 aa10.37□□□□□ -0.75
SKA1-205ENST00000494518 ANKRD61A6NGH8 418 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 AKR7A2O43488 359 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 PAHP00439 452 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 EEF1B2P24534 225 aaKnown RBP10.36□□□□□ -0.75
SKA1-205ENST00000494518 PAX6P26367 422 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 SAA4P35542 130 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 DDOSTP39656 456 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 SLC15A1P46059 708 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 SLC25A1P53007 311 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 GRB2P62993 217 aaKnown RBP10.36□□□□□ -0.75
SKA1-205ENST00000494518 LRRC10Q5BKY1 277 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 LINC01590Q5TEZ4 76 aa10.36□□□□□ -0.75
SKA1-205ENST00000494518 STUMQ69YW2 141 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms