RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 ZNF724A8MTY0 619 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 MCRIP1C9JLW8 97 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 SCDO00767 359 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 ADCYAP1P18509 176 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 TAS2R50P59544 299 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF763Q0D2J5 394 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 CTU2Q2VPK5 515 aaKnown RBP10.3□□□□□ -0.76
BRCA1-222ENST00000493919 ATP6AP1LQ52LC2 224 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF628Q5EBL2 1059 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 Q6ZSR9 355 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 OR2T35Q8NGX2 323 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 CNOT9Q92600 299 aaKnown RBP10.3□□□□□ -0.76
BRCA1-222ENST00000493919 UBE2FQ969M7 185 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 ELMOD3Q96FG2 381 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 THOC3Q96J01 351 aaKnown RBP10.3□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF583Q96ND8 569 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 TECTBQ96PL2 329 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 EPYCQ99645 322 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 FAIM2Q9BWQ8 316 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 ADGRL4Q9HBW9 690 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 PNPOQ9NVS9 261 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 GPR83Q9NYM4 423 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 EXOSC1Q9Y3B2 195 aaKnown RBP10.3□□□□□ -0.76
BRCA1-222ENST00000493919 FAM208BQ5VWN6 2430 aa10.3□□□□□ -0.76
BRCA1-222ENST00000493919 C1orf226A1L170 272 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 TRAPPC2LH3BP13 241 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 EMC8O43402 210 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 SLC19A2O60779 497 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 DFFBO76075 338 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 MT-ND1P03886 318 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 OR5AC1P0C628 307 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 SDC1P18827 310 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 PPOXP50336 477 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 PIGFQ07326 219 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 Q0VFX4 171 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 HMGN3Q15651 99 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 C5orf47Q569G3 176 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 XKR7Q5GH72 579 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 WBP2NLQ6ICG8 309 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 LAIR2Q6ISS4 152 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 NOXRED1Q6NXP6 359 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 STEAP1BQ6NZ63 245 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 DRAM2Q6UX65 266 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 GDPGP1Q6ZNW5 385 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 MAVSQ7Z434 540 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 MOGAT3Q86VF5 341 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 BOD1L2Q8IYS8 172 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 C1orf87Q8N0U7 546 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 BPIFB2Q8N4F0 458 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 RNF148Q8N7C7 305 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 TMEM185AQ8NFB2 350 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 FDCSPQ8NFU4 85 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 OR4C5Q8NGB2 326 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 HPSE2Q8WWQ2 592 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 PHYHIPLQ96FC7 376 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 UBL7Q96S82 380 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-222ENST00000493919 CST9LQ9H4G1 147 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 CNTD2Q9H8S5 307 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 HRASLSQ9HDD0 168 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 STEAP1Q9UHE8 339 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF230Q9UIE0 474 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-222ENST00000493919 SPIN1Q9Y657 262 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-222ENST00000493919 TLN1Q9Y490 2541 aaKnown RBP10.29□□□□□ -0.76
BRCA1-222ENST00000493919 IGHV2-70DA0A0C4DH43 119 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 KIR2DL5BA0A0G2JN68 375 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 KIR2DL5BA0A0G2JPC4 375 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 TSPAN15O95858 294 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 PRPH2P23942 346 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 AZGP1P25311 298 aaKnown RBP10.29□□□□□ -0.76
BRCA1-222ENST00000493919 MST1P26927 711 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 CHRNB4P30926 498 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 TGFBR1P36897 503 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 HBA1P69905 142 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 CDK5R2Q13319 367 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 PYDC2Q56P42 97 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 OR2A2Q6IF42 318 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 TCTN3Q6NUS6 607 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 PCSK4Q6UW60 755 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 FBXW12Q6X9E4 464 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 KIR2DL5AQ8N109 375 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 SIRT6Q8N6T7 355 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 OR4S1Q8NGB4 309 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 OR9Q2Q8NGE9 314 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 ANKRD9Q96BM1 317 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-222ENST00000493919 ROPN1LQ96C74 230 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 DGAT2Q96PD7 388 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 TSSK3Q96PN8 268 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 ABHD1Q96SE0 405 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 NUDT9Q9BW91 350 aa10.29□□□□□ -0.76
BRCA1-222ENST00000493919 ZNF71Q9NQZ8 489 aaPredicted RBP10.29□□□□□ -0.76
BRCA1-222ENST00000493919 TRAV30A0A087WSZ9 112 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 A0A087WZY1 265 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 A0A1W2PS29 197 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 C17orf105B2RV13 164 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 TSPAN13O95857 204 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 EPXP11678 715 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 ETFAP13804 333 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 COX7A2P14406 83 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 CXCL2P19875 107 aa10.28□□□□□ -0.76
BRCA1-222ENST00000493919 CXCR1P25024 350 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms