RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 PCGF3Q3KNV8 242 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 DOK3Q7L591 496 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 EGFL6Q8IUX8 553 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 PLPP7Q8NBV4 271 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 OR14K1Q8NGZ2 314 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 ITLN1Q8WWA0 313 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 PIGCQ92535 297 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 OR2V2Q96R30 315 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 MND1Q9BWT6 205 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 SAP30LQ9HAJ7 183 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 CACNG2Q9Y698 323 aa15.17■□□□□ 0.02
PDLIM7-208ENST00000493815 ZNF850A8MQ14 1090 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 ADH4P08319 380 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 CCL1P22362 96 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 COL8A2P25067 703 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 SLC3A1Q07837 685 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 RIPPLY1Q0D2K3 151 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 CDK5R1Q15078 307 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 RNLSQ5VYX0 342 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 RPL22L1Q6P5R6 122 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 PRSS48Q7RTY5 328 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 CSNK2A3Q8NEV1 391 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 WFDC11Q8NEX6 87 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 OR5AK2Q8NH90 309 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 BARX1Q9HBU1 254 aaPredicted RBP15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 TRIM36Q9NQ86 728 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 NKIRAS2Q9NYR9 191 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 LSM2Q9Y333 95 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 V9GYS6 101 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 A0A1B0GWJ7 208 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 LOC390937A0A1W2PQ73 354 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 MTRF1O75570 445 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 TNFSF4P23510 183 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 MRPL28Q13084 256 aaKnown RBP15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 PRDX4Q13162 271 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 MAB21L1Q13394 359 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 MED22Q15528 200 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 CCDC58Q4VC31 144 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 CEP78Q5JTW2 689 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 FAM209AQ5JX71 171 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 UBASH3BQ8TF42 649 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 YIPF5Q969M3 257 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 DIRC2Q96SL1 478 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 CXXC4Q9H2H0 198 aa15.16■□□□□ 0.02
PDLIM7-208ENST00000493815 CELSR1Q9NYQ6 3014 aa15.15■□□□□ 0.02
PDLIM7-208ENST00000493815 ZNF816-ZNF321PA0A0X1KG74 233 aa15.15■□□□□ 0.02
PDLIM7-208ENST00000493815 ISG15P05161 165 aa15.15■□□□□ 0.02
PDLIM7-208ENST00000493815 CD55P08174 381 aa15.15■□□□□ 0.02
PDLIM7-208ENST00000493815 GNALP38405 381 aa15.15■□□□□ 0.02
PDLIM7-208ENST00000493815 CLEC12BQ2HXU8 276 aa15.15■□□□□ 0.02
PDLIM7-208ENST00000493815 TMEM244Q5VVB8 128 aa15.15■□□□□ 0.02
PDLIM7-208ENST00000493815 FTMTQ8N4E7 242 aa15.15■□□□□ 0.02
PDLIM7-208ENST00000493815 OR8S1Q8NH09 359 aa15.15■□□□□ 0.02
PDLIM7-208ENST00000493815 RGP1Q92546 391 aaPredicted RBP15.15■□□□□ 0.02
PDLIM7-208ENST00000493815 MEGF10Q96KG7 1140 aa15.15■□□□□ 0.02
PDLIM7-208ENST00000493815 EGLN1Q9GZT9 426 aa15.15■□□□□ 0.02
PDLIM7-208ENST00000493815 MAST4O15021 2626 aa15.15■□□□□ 0.02
PDLIM7-208ENST00000493815 LOC100289279A0A1B0GTE1 492 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 TMEM212A6NML5 194 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 OGG1O15527 345 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 GMDSO60547 372 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 CST4P01036 141 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 ATP6V1B1P15313 513 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 GABARAPL2P60520 117 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 SPHARQ15513 63 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 PRAMEF6Q5VXH4 476 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 Q6ZSR3 168 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 OR13C5Q8NGS8 318 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 Q96MF0 132 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 FGF23Q9GZV9 251 aaPredicted RBP15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 COMMD4Q9H0A8 199 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 PLEKHA1Q9HB21 404 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 DCAF16Q9NXF7 216 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 IL19Q9UHD0 177 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 ENPP5Q9UJA9 477 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 HHLA2Q9UM44 414 aa15.14■□□□□ 0.01
PDLIM7-208ENST00000493815 IGHV1-69-2A0A0G2JMI3 117 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 CELP19835 753 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 ACHEP22303 614 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 MPPED2Q15777 294 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 DMKNQ6E0U4 476 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 OR13C3Q8NGS6 347 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 ZNF420Q8TAQ5 688 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 RPS4Y2Q8TD47 263 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 HAVCR2Q8TDQ0 301 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 CCL17Q92583 94 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 RDH5Q92781 318 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 GHSRQ92847 366 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 ITPKCQ96DU7 683 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 SMIM19Q96E16 107 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 ADAT3Q96EY9 351 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 YTHDF1Q9BYJ9 559 aaKnown RBP15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 SLC22A4Q9H015 551 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 GPR173Q9NS66 373 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 UFSP2Q9NUQ7 469 aa15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 ZNF469Q96JG9 3925 aaPredicted RBP15.13■□□□□ 0.01
PDLIM7-208ENST00000493815 GRPP07492 148 aa15.12■□□□□ 0.01
PDLIM7-208ENST00000493815 HSMCR30P0CW71 290 aa15.12■□□□□ 0.01
PDLIM7-208ENST00000493815 TESK1Q15569 626 aa15.12■□□□□ 0.01
PDLIM7-208ENST00000493815 CLEC2AQ6UVW9 174 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms