RNA–Protein interactions for RNA: ENST00000493265.2

LIME1-208, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 2

Gene LIME1, Length 661 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-208ENST00000493265 TRIM64CA6NLI5 447 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 ANKRD30BLA7E2S9 258 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 IQCF6A8MYZ5 107 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 M0R233 179 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 SPRY3O43610 288 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 CD8AP01732 235 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 HLA-DPB1P04440 258 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 DANCRP0C864 163 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 CCL1P22362 96 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 CA6P23280 308 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 GNALP38405 381 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 LIPAP38571 399 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 OR8B8Q15620 311 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 SSX1Q16384 188 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 MOGQ16653 247 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 SWI5Q1ZZU3 235 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 DMRTC1Q5HYR2 192 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 PHC2Q8IXK0 858 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 PLPP7Q8NBV4 271 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 OR8G5Q8NG78 346 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 PIGCQ92535 297 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 VRK1Q99986 396 aaPredicted RBP14.67□□□□□ -0.06
LIME1-208ENST00000493265 TRAF4Q9BUZ4 470 aaPredicted RBP14.67□□□□□ -0.06
LIME1-208ENST00000493265 PAPOLGQ9BWT3 736 aaKnown RBP14.67□□□□□ -0.06
LIME1-208ENST00000493265 TPK1Q9H3S4 243 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 PPP1R3EQ9H7J1 279 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 GPR160Q9UJ42 338 aa14.67□□□□□ -0.06
LIME1-208ENST00000493265 A0A1W2PPK0 400 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 ZSCAN5BA6NJL1 495 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 ZNF850A8MQ14 1090 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 H0YL77 283 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 OCM2P0CE71 109 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 ZNF12P17014 697 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 DDOSTP39656 456 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 EVX1P49640 407 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 ZNF81P51508 661 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 INSL4Q14641 139 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 YIF1BQ5BJH7 314 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 SYT6Q5T7P8 510 aaPredicted RBP14.66□□□□□ -0.06
LIME1-208ENST00000493265 C20orf204Q6ZNR8 217 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 Q6ZR03 302 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 CSNK2A3Q8NEV1 391 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 OR2Z1Q8NG97 314 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 OR10AD1Q8NGE0 317 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 OR14A2Q96R54 314 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 CCL19Q99731 98 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 CACNG6Q9BXT2 260 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 GPR173Q9NS66 373 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 TMEM100Q9NV29 134 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 ENPP5Q9UJA9 477 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 EDARQ9UNE0 448 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 NIPBLQ6KC79 2804 aaeCLIP14.66□□□□□ -0.06
LIME1-208ENST00000493265 ABCA4P78363 2273 aa14.66□□□□□ -0.06
LIME1-208ENST00000493265 ACANP16112 2415 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 ZNF816-ZNF321PA0A0X1KG74 233 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 LOC390937A0A1W2PQ73 354 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 ANKRD61A6NGH8 418 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 CCRL2O00421 344 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 CDKN1AP38936 164 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 MMP15P51511 669 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 RPS11P62280 158 aaKnown RBP eCLIP14.65□□□□□ -0.06
LIME1-208ENST00000493265 PRDX4Q13162 271 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 GPR50Q13585 617 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 OR8G1Q15617 311 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 MOB3CQ70IA8 216 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 DTX2Q86UW9 622 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 FTMTQ8N4E7 242 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 ORAI1Q96D31 301 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 ADAT3Q96EY9 351 aaPredicted RBP14.65□□□□□ -0.06
LIME1-208ENST00000493265 ADAT1Q9BUB4 502 aaKnown RBP14.65□□□□□ -0.06
LIME1-208ENST00000493265 ZNF275Q9NSD4 429 aaPredicted RBP14.65□□□□□ -0.06
LIME1-208ENST00000493265 SCOCQ9UIL1 159 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 PMF1-BGLAPU3KQ54 211 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 ROS1P08922 2347 aa14.65□□□□□ -0.06
LIME1-208ENST00000493265 RAI1Q7Z5J4 1906 aaPredicted RBP14.64□□□□□ -0.07
LIME1-208ENST00000493265 IGHV3-64DA0A0J9YX35 117 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 TPD52L2O43399 206 aaKnown RBP14.64□□□□□ -0.07
LIME1-208ENST00000493265 CD1AP06126 327 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 JUNBP17275 347 aaPredicted RBP14.64□□□□□ -0.07
LIME1-208ENST00000493265 HOXB4P17483 251 aaPredicted RBP14.64□□□□□ -0.07
LIME1-208ENST00000493265 Q499Y3 187 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 ACSM3Q53FZ2 586 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 CEP78Q5JTW2 689 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 PLCXD3Q63HM9 321 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 C11orf71Q6IPW1 123 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 CEACAM19Q7Z692 300 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 TGIF2LYQ8IUE0 185 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 MS4A15Q8N5U1 240 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 CCDC54Q8NEL0 328 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 OR13G1Q8NGZ3 307 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 NPRL2Q8WTW4 380 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 TMIGD2Q96BF3 282 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 FOXC2Q99958 501 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 SLC30A2Q9BRI3 323 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 CYSLTR2Q9NS75 346 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 NDUFB11Q9NX14 153 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 MRPL15Q9P015 296 aaKnown RBP14.64□□□□□ -0.07
LIME1-208ENST00000493265 PLEKHA6Q9Y2H5 1048 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 PLCE1Q9P212 2302 aa14.64□□□□□ -0.07
LIME1-208ENST00000493265 TRBV5-5A0A0J9YX44 114 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms