RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 USE1Q9NZ43 259 aa16.48■□□□□ 0.23
NELFE-212ENST00000492539 CD300LBA8K4G0 201 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 M0R135 149 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 GMDSO60547 372 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 SPI1P17947 270 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 ANOS1P23352 680 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 PYCR1P32322 319 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 KRTAP10-3P60369 221 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 SFRP4Q6FHJ7 346 aaPredicted RBP16.47■□□□□ 0.23
NELFE-212ENST00000492539 BRICD5Q6PL45 260 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 GATAD2BQ8WXI9 593 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 ZNF799Q96GE5 643 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 WDFY2Q96P53 400 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 GABARAPL3Q9BY60 117 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 SIRPDQ9H106 197 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 SMURF1Q9HCE7 757 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 ACOXLQ9NUZ1 547 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 KCNG2Q9UJ96 466 aa16.47■□□□□ 0.23
NELFE-212ENST00000492539 ZAR1LA6NP61 321 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 C3orf80F5H4A9 247 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 EI24O14681 340 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 ADAM20O43506 726 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 NDUFA2O43678 99 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 FCN3O75636 299 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 ALPLP05186 524 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 PAICSP22234 425 aaKnown RBP16.46■□□□□ 0.23
NELFE-212ENST00000492539 OTX1P32242 354 aaPredicted RBP16.46■□□□□ 0.23
NELFE-212ENST00000492539 ZNF92Q03936 586 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 SNAI3Q3KNW1 292 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 PNLDC1Q8NA58 520 aaKnown RBP16.46■□□□□ 0.23
NELFE-212ENST00000492539 SSMEM1Q8WWF3 244 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 ZNRF4Q8WWF5 429 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 DYRK2Q92630 601 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 C9orf16Q9BUW7 83 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 PRRG3Q9BZD7 231 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 MMP27Q9H306 513 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 TRIM36Q9NQ86 728 aa16.46■□□□□ 0.23
NELFE-212ENST00000492539 TRAV38-1A0A0B4J264 116 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 OOEPA6NGQ2 149 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 FAM183AA6NL82 134 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 PRR23D1E9PI22 279 aaPredicted RBP16.45■□□□□ 0.22
NELFE-212ENST00000492539 M0QZ24 198 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 HLA-DQA2P01906 255 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 GYPBP06028 91 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 PRR23D2P0DMB1 279 aaPredicted RBP16.45■□□□□ 0.22
NELFE-212ENST00000492539 CLUP10909 449 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 ALDH3A2P51648 485 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 BLVRAP53004 296 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 PDCD1Q15116 288 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 OR8B8Q15620 311 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 METTL11BQ5VVY1 283 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 SLX4IPQ5VYV7 408 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 GCSAMQ8N6F7 178 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 OR51L1Q8NGJ5 315 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 TBC1D15Q8TC07 691 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 SPTSSAQ969W0 71 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 TVP23BQ9NYZ1 205 aa16.45■□□□□ 0.22
NELFE-212ENST00000492539 MRPL15Q9P015 296 aaKnown RBP16.45■□□□□ 0.22
NELFE-212ENST00000492539 IGHV1-69DA0A0B4J2H0 117 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 A0A0G2JK05 382 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 TIMM23O14925 209 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 BAG2O95816 211 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 IGHV1-69P01742 117 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 EPHA2P29317 976 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 FMO3P31513 532 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 SNAPC1Q16533 368 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 C11orf91Q3C1V1 193 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 GLYATL3Q5SZD4 288 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 LINC01590Q5TEZ4 76 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 C12orf73Q69YU5 71 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 PLBD1Q6P4A8 553 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 LDLRAD3Q86YD5 345 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 CBR4Q8N4T8 237 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 BOLLQ8N9W6 283 aaKnown RBP16.44■□□□□ 0.22
NELFE-212ENST00000492539 OR2AE1Q8NHA4 323 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 RASSF4Q9H2L5 321 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 MED20Q9H944 212 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 C1orf123Q9NWV4 160 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 ORC6Q9Y5N6 252 aa16.44■□□□□ 0.22
NELFE-212ENST00000492539 C5orf63A6NC05 138 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 CLPXO76031 633 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 LHBP01229 141 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 ZNF823P16415 610 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 RPS27P42677 84 aaKnown RBP16.43■□□□□ 0.22
NELFE-212ENST00000492539 TEX36Q5VZQ5 186 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 ASPHD2Q6ICH7 369 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 DRAM2Q6UX65 266 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 FAM90A1Q86YD7 464 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 CPOQ8IVL8 374 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 SPERTQ8NA61 448 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 OR6K6Q8NGW6 343 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 LINC01006Q8NI28 216 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 LHX4Q969G2 390 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 OTULINQ96BN8 352 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 RIBC2Q9H4K1 309 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 KAAG1Q9UBP8 84 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 RNF114Q9Y508 228 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 COMMD3-BMI1R4GMX3 469 aa16.43■□□□□ 0.22
NELFE-212ENST00000492539 A0A0U1RQK1 487 aa16.42■□□□□ 0.22
NELFE-212ENST00000492539 GGT3PA6NGU5 568 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms