RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 BRICD5Q6PL45 260 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 WDR5BQ86VZ2 330 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 C20orf196Q8IYI0 205 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 ESX1Q8N693 406 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 OR4K15Q8NH41 348 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 PAQR8Q8TEZ7 354 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 PPP1R1CQ8WVI7 109 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 DYRK2Q92630 601 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 FOXRED1Q96CU9 486 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-220ENST00000492280 ZNF845Q96IR2 970 aaPredicted RBP10.93□□□□□ -0.66
HMGN1-220ENST00000492280 HES7Q9BYE0 225 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 ZNF700Q9H0M5 742 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 UPB1Q9UBR1 384 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 PISDQ9UG56 409 aa10.93□□□□□ -0.66
HMGN1-220ENST00000492280 CACNA1GO43497 2377 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 MPTX1A8MV57 137 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 DHHO43323 396 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 SPRY1O43609 319 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-220ENST00000492280 IFNA6P05013 189 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 FCGR2AP12318 317 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 RAB6AP20340 208 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 GABRR1P24046 479 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 GUCA1AP43080 201 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-220ENST00000492280 PDCD1Q15116 288 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 KISS1Q15726 138 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 NKAPLQ5M9Q1 402 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 CDCP2Q5VXM1 449 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 SLC23A3Q6PIS1 610 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 OR51T1Q8NGJ9 327 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 OR5M8Q8NGP6 311 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 CCDC107Q8WV48 283 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 LINC00052Q96N35 136 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 ANGPTL4Q9BY76 406 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 MS4A7Q9GZW8 240 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-220ENST00000492280 NELFAQ9H3P2 528 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 CRLF2Q9HC73 371 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 OR5H14A6NHG9 310 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 C19orf67A6NJJ6 358 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 M0R135 149 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 ONECUT2O95948 504 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 RRASP10301 218 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 ACKR3P25106 362 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 MLF1P58340 268 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 ZMYND11Q15326 602 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 ZNF660Q6AZW8 331 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-220ENST00000492280 PPP1R32Q7Z5V6 425 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 ZNF546Q86UE3 836 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 SLC38A6Q8IZM9 456 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 TMEM123Q8N131 208 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 ARMC10Q8N2F6 343 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 ADPRHL1Q8NDY3 354 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 FGFBP3Q8TAT2 258 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 ZNF799Q96GE5 643 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 SLC25A21Q9BQT8 299 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-220ENST00000492280 UQCC2Q9BRT2 126 aa10.92□□□□□ -0.66
HMGN1-220ENST00000492280 NXT1Q9UKK6 140 aaKnown RBP10.92□□□□□ -0.66
HMGN1-220ENST00000492280 GVINP1Q7Z2Y8 2422 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 IGKV1D-8A0A087WSZ0 117 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 CCDC187A0A096LP49 1063 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 TLX3O43711 291 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-220ENST00000492280 HIST1H1DP16402 221 aaKnown RBP10.91□□□□□ -0.66
HMGN1-220ENST00000492280 ZBTB25P24278 435 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 DSCR4P56555 118 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-220ENST00000492280 SRYQ05066 204 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 SPINK14Q6IE38 97 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 RAB12Q6IQ22 244 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 TMEM65Q6PI78 240 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 GALNTL5Q7Z4T8 443 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 ABHD3Q8WU67 409 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 FBXW5Q969U6 566 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 WBP1Q96G27 269 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 EDEM2Q9BV94 578 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 ZNF701Q9NV72 531 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-220ENST00000492280 MGAQ8IWI9 3026 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 DCHS1Q96JQ0 3298 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 C9orf170A2RU37 121 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 ADAP1O75689 374 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 HOXA6P31267 233 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 LUMP51884 338 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-220ENST00000492280 ZXDAP98168 799 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 SSBP1Q04837 148 aaKnown RBP10.91□□□□□ -0.66
HMGN1-220ENST00000492280 EXT1Q16394 746 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 DOK3Q7L591 496 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 C6orf201Q7Z4U5 140 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 PRRT1Q99946 306 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 TMPRSS13Q9BYE2 586 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 SDHAF2Q9NX18 166 aa10.91□□□□□ -0.66
HMGN1-220ENST00000492280 TPPPO94811 219 aa10.9□□□□□ -0.66
HMGN1-220ENST00000492280 CELA3AP09093 270 aa10.9□□□□□ -0.66
HMGN1-220ENST00000492280 MGMTP16455 207 aa10.9□□□□□ -0.66
HMGN1-220ENST00000492280 ADH6P28332 368 aa10.9□□□□□ -0.66
HMGN1-220ENST00000492280 BLVRBP30043 206 aaPredicted RBP10.9□□□□□ -0.66
HMGN1-220ENST00000492280 MC2RQ01718 297 aa10.9□□□□□ -0.66
HMGN1-220ENST00000492280 LYG2Q86SG7 212 aa10.9□□□□□ -0.66
HMGN1-220ENST00000492280 SUN5Q8TC36 379 aa10.9□□□□□ -0.66
HMGN1-220ENST00000492280 RHBDD1Q8TEB9 315 aa10.9□□□□□ -0.66
HMGN1-220ENST00000492280 PTX4Q96A99 478 aa10.9□□□□□ -0.66
HMGN1-220ENST00000492280 MOB1AQ9H8S9 216 aa10.9□□□□□ -0.66
HMGN1-220ENST00000492280 LOXL2Q9Y4K0 774 aa10.9□□□□□ -0.66
HMGN1-220ENST00000492280 AUP1Q9Y679 476 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms