RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	FAM90A1	Q86YD7	464 aa		12.7	□□□□□ -0.38
MRPL55-231	ENST00000492170	GCSAM	Q8N6F7	178 aa		12.7	□□□□□ -0.38
MRPL55-231	ENST00000492170	KIR3DL3	Q8N743	410 aa		12.7	□□□□□ -0.38
MRPL55-231	ENST00000492170	OR6K6	Q8NGW6	343 aa		12.7	□□□□□ -0.38
MRPL55-231	ENST00000492170	OR4Q3	Q8NH05	313 aa		12.7	□□□□□ -0.38
MRPL55-231	ENST00000492170	SPSB4	Q96A44	273 aa		12.7	□□□□□ -0.38
MRPL55-231	ENST00000492170	TSSK6	Q9BXA6	273 aa		12.7	□□□□□ -0.38
MRPL55-231	ENST00000492170	ACOXL	Q9NUZ1	547 aa		12.7	□□□□□ -0.38
MRPL55-231	ENST00000492170	C1RL	Q9NZP8	487 aa		12.7	□□□□□ -0.38
MRPL55-231	ENST00000492170	IGHV1-69D	A0A0B4J2H0	117 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	ZNF593	O00488	134 aa	Predicted RBP	12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	DVL1	O14640	695 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	ECD	O95905	644 aa	Predicted RBP	12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	IFNG	P01579	166 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	IGHV1-69	P01742	117 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	GYPB	P06028	91 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	ANXA2	P07355	339 aa	Known RBP	12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	SPI1	P17947	270 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	PRKACG	P22612	351 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	FAS	P25445	335 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	HSD11B1	P28845	292 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	CX3CR1	P49238	355 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	BLVRA	P53004	296 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	RPL15	P61313	204 aa	Known RBP	12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	KPNB1	Q14974	876 aa	Known RBP	12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	TEX30	Q5JUR7	227 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	TEX36	Q5VZQ5	186 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	OLFML2A	Q68BL7	652 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	BTN2A1	Q7KYR7	527 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	ZNF511	Q8NB15	262 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	OR2T33	Q8NG76	320 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	OR5K1	Q8NHB7	308 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	TBC1D15	Q8TC07	691 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	DNAJC9	Q8WXX5	260 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	ST8SIA4	Q92187	359 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	LHX4	Q969G2	390 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	GABARAPL1	Q9H0R8	117 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	SIRPD	Q9H106	197 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	RASSF4	Q9H2L5	321 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	TOR3A	Q9H497	397 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	SP140L	Q9H930	580 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	KAAG1	Q9UBP8	84 aa		12.69	□□□□□ -0.38
MRPL55-231	ENST00000492170	IGHV3OR15-7	A0A075B7D8	119 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	RIIAD1	A6NNX1	92 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	LHB	P01229	141 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	APOC1	P02654	83 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	OSM	P13725	252 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	ZNF3	P17036	446 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	CFL1	P23528	166 aa	Known RBP	12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	ARF6	P62330	175 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	RELB	Q01201	579 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	DEFA6	Q01524	100 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	MICB	Q29980	383 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	BRICD5	Q6PL45	260 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	SLC16A9	Q7RTY1	509 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	DPY19L4	Q7Z388	723 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	SCCPDH	Q8NBX0	429 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	TEX47	Q8TBZ9	253 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	LRRC29	Q8WV35	223 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	LRTOMT	Q8WZ04	291 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	NMNAT2	Q9BZQ4	307 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	ZNF556	Q9HAH1	456 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	RNPEPL1	Q9HAU8	725 aa		12.68	□□□□□ -0.38
MRPL55-231	ENST00000492170	CLPSL1	A2RUU4	121 aa		12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170		H3BNX3	289 aa		12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	CLU	P10909	449 aa		12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	MUC1	P15941	1255 aa	Predicted RBP	12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	FAM3A	P98173	230 aa		12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	POU4F2	Q12837	409 aa		12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	EIF2B1	Q14232	305 aa	Known RBP	12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	ZFP1	Q6P2D0	407 aa		12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	SLC36A1	Q7Z2H8	476 aa		12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	OR1M1	Q8NGA1	313 aa		12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	PYDC1	Q8WXC3	89 aa		12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	DYRK2	Q92630	601 aa		12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	REEP6	Q96HR9	211 aa		12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	RAB3IP	Q96QF0	476 aa	Predicted RBP	12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	CNTD2	Q9H8S5	307 aa		12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	CMC2	Q9NRP2	79 aa		12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	RPUSD1	Q9UJJ7	312 aa	Known RBP	12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	KPTN	Q9Y664	436 aa		12.67	□□□□□ -0.38
MRPL55-231	ENST00000492170	hCG_38984	A0A1B0GV85	526 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170		A0A1B0GVI7	797 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170		H3BN98	237 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	FCN3	O75636	299 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	GNAL	P38405	381 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	NAA10	P41227	235 aa	Predicted RBP	12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	DAP	P51397	102 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	CSNK2B	P67870	215 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	CDK5	Q00535	292 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	SRSF4	Q08170	494 aa	Known RBP	12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	SNCB	Q16143	134 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	OCLN	Q16625	522 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	CDON	Q4KMG0	1287 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	MIDN	Q504T8	468 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	PDLIM3	Q53GG5	364 aa	Predicted RBP	12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	FAM57B	Q71RH2	274 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	AMIGO2	Q86SJ2	522 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	WDR86	Q86TI4	376 aa		12.66	□□□□□ -0.38
MRPL55-231	ENST00000492170	LDLRAD3	Q86YD5	345 aa		12.66	□□□□□ -0.38

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