RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 MFSD8Q8NHS3 518 aa8.23□□□□□ -1.09
BRCA1-219ENST00000491747 NAA11Q9BSU3 229 aaPredicted RBP8.23□□□□□ -1.09
BRCA1-219ENST00000491747 TCF7L1Q9HCS4 588 aa8.23□□□□□ -1.09
BRCA1-219ENST00000491747 FOXJ3Q9UPW0 622 aa8.23□□□□□ -1.09
BRCA1-219ENST00000491747 IER3IP1Q9Y5U9 82 aa8.23□□□□□ -1.09
BRCA1-219ENST00000491747 FLVCR1Q9Y5Y0 555 aa8.23□□□□□ -1.09
BRCA1-219ENST00000491747 LRBAP50851 2863 aa8.23□□□□□ -1.09
BRCA1-219ENST00000491747 FAM221AA4D161 298 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 ARPC5O15511 151 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 AHSA1O95433 338 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 MAPK3P27361 379 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-219ENST00000491747 DCTDP32321 178 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 RPL4P36578 427 aaKnown RBP8.22□□□□□ -1.09
BRCA1-219ENST00000491747 PSMB10P40306 273 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 GMFBP60983 142 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 BTN1A1Q13410 526 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 FHL1Q13642 323 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 RBMS2Q15434 407 aaKnown RBP8.22□□□□□ -1.09
BRCA1-219ENST00000491747 BEND4Q6ZU67 534 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 OR6M1Q8NGM8 313 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 OR6K6Q8NGW6 343 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 RPS4Y2Q8TD47 263 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 FAM222BQ8WU58 562 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 ST8SIA4Q92187 359 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 SGTBQ96EQ0 304 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 ZNF385AQ96PM9 386 aaKnown RBP8.22□□□□□ -1.09
BRCA1-219ENST00000491747 GFI1Q99684 422 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 SHARPINQ9H0F6 387 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 TAS2R8Q9NYW2 309 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 TRAV36DV7A0A075B6V5 113 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 A8MXK9 166 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 C16orf97H3BN30 126 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 SIAH2O43255 324 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 ZFPL1O95159 310 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 IGHV3-9P01782 118 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 BGLAPP02818 100 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 HIST1H2ABP04908 130 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 THBDP07204 575 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 PPP3CBP16298 524 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 CDK2P24941 298 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 CALCRP30988 508 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 FOXG1P55316 489 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-219ENST00000491747 CLDN12P56749 244 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 HLXQ14774 488 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-219ENST00000491747 DAZAP2Q15038 168 aaPredicted RBP8.22□□□□□ -1.09
BRCA1-219ENST00000491747 LRRN1Q6UXK5 716 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 DPY19L2P2Q6ZN68 376 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 HIST3H2AQ7L7L0 130 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 COQ8AQ8NI60 647 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 HIST1H2ACQ93077 130 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 MOGAT1Q96PD6 335 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 C1QTNF6Q9BXI9 259 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 OR5V1Q9UGF6 321 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 OPN4Q9UHM6 478 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 COPS3Q9UNS2 423 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 NOSIPQ9Y314 301 aaKnown RBP8.22□□□□□ -1.09
BRCA1-219ENST00000491747 ABCA12Q86UK0 2595 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 CSMD1Q96PZ7 3565 aa8.22□□□□□ -1.09
BRCA1-219ENST00000491747 A6NNC1 897 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 MCIDASD6RGH6 385 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 SELENOFO60613 162 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 CTAG2O75638 210 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 RBBP9O75884 186 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 TACSTD2P09758 323 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 IL32P24001 234 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 GRPRP30550 384 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 SCAND1P57086 179 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 TAS2R20P59543 309 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 PRR14LQ5THK1 2151 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 TMEM225Q6GV28 225 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 FAAP20Q6NZ36 180 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 ALKAL2Q6UX46 152 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 FAM220AQ7Z4H9 259 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 OR9K2Q8NGE7 335 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 ZNF417Q8TAU3 575 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 NRGNQ92686 78 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 ORAI1Q96D31 301 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 CXorf58Q96LI9 332 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 LURAP1Q96LR2 239 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 ZNF587Q96SQ5 575 aaPredicted RBP8.21□□□□□ -1.09
BRCA1-219ENST00000491747 NMNAT3Q96T66 252 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 GINS4Q9BRT9 223 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 ARL6Q9H0F7 186 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 B3GAT1Q9P2W7 334 aa8.21□□□□□ -1.09
BRCA1-219ENST00000491747 A0A1B0GW55 424 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 A0A1W2PPR1 153 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 ATP6V1G2-DDX39BF2Z307 99 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 MS4A18H0YCH9 400 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 ARPC3O15145 178 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 DUX4L2P0CJ85 424 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 DUX4L3P0CJ86 424 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 DUX4L4P0CJ87 422 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 DUX4L5P0CJ88 424 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 DUX4L6P0CJ89 424 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 DUX4L7P0CJ90 424 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 SPI1P17947 270 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 IGHV1-2P23083 117 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 GK2Q14410 553 aaPredicted RBP8.21□□□□□ -1.1
BRCA1-219ENST00000491747 MS4A18Q3C1V0 323 aa8.21□□□□□ -1.1
BRCA1-219ENST00000491747 Q499Y3 187 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms