RNA–Protein interactions for RNA: ENST00000491552.1

MSH5-SAPCD1-206, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

TSL 3

Gene MSH5-SAPCD1, Length 706 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-206ENST00000491552 NRG4Q8WWG1 115 aa13.72□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 RORBQ92753 470 aa13.72□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 MSI2Q96DH6 328 aaKnown RBP13.72□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 MYCBPQ99417 103 aaPredicted RBP13.72□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 GAL3ST1Q99999 423 aa13.72□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 FN3KRPQ9HA64 309 aa13.72□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 ABCB9Q9NP78 766 aa13.72□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 INPP5EQ9NRR6 644 aa13.72□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 UFSP2Q9NUQ7 469 aa13.72□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 ACOXLQ9NUZ1 547 aa13.72□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 C14orf119Q9NWQ9 140 aa13.72□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 SLC22A13Q9Y226 551 aa13.72□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 MPC1Q9Y5U8 109 aa13.72□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 HSPE1-MOB4S4R3N1 261 aa13.72□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 DYSFO75923 2080 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 ZNF816-ZNF321PA0A0X1KG74 233 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 LOC100289279A0A1B0GTE1 492 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 ANXA2P2A6NMY6 339 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 FAM20BO75063 409 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 MTRF1O75570 445 aaKnown RBP13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 DHRS3O75911 302 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 CYB5R3P00387 301 aaPredicted RBP13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 IRF2P14316 349 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 PMELP40967 661 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 BTG1P62324 171 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 PRDX4Q13162 271 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 GALEQ14376 348 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 MPPED2Q15777 294 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 THAP5Q7Z6K1 395 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 PIGCQ92535 297 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 RAB39BQ96DA2 213 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 C1orf159Q96HA4 380 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 ALG8Q9BVK2 526 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 PPP1R3EQ9H7J1 279 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 ZNF665Q9H7R5 613 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 YAE1D1Q9NRH1 226 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 MYRFQ9Y2G1 1151 aa13.71□□□□□ -0.21
MSH5-SAPCD1-206ENST00000491552 TEP1Q99973 2627 aaKnown RBP13.71□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ZNF850A8MQ14 1090 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 H0YJX3 145 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 J3QLW9 94 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 P2RY10O00398 339 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 GRPP07492 148 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 GNAO1P09471 354 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ZNF19P17023 458 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 PSMB10P40306 273 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 CDH15P55291 814 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 OR12D2P58182 307 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 LMO4P61968 165 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 RIPPLY1Q0D2K3 151 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 WDR38Q5JTN6 314 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ZBTB37Q5TC79 503 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ZNF771Q7L3S4 317 aaPredicted RBP13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 KRT74Q7RTS7 529 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 LHFPL3Q86UP9 236 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ZDHHC23Q8IYP9 409 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 LINC01356Q8N9X3 169 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ITPKCQ96DU7 683 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 C4orf36Q96KX1 117 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 MICU1Q9BPX6 476 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 RTL8AQ9BWD3 113 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 VCX3BQ9H321 246 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 FGF20Q9NP95 211 aaPredicted RBP13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ERVK13-1Q9NX77 482 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 PIGLQ9Y2B2 252 aa13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 YLPM1P49750 1951 aaKnown RBP13.7□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 A0A1B0GTI1 187 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 A0A1B0GVI7 797 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 IRGMA1A4Y4 181 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 A6NLC8 198 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 A8MV72 311 aaPredicted RBP13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 INAFM1C9JVW0 142 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 IGHV2-5P01817 119 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 FAHP16930 419 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 CCL1P22362 96 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 MDH2P40926 338 aaKnown RBP13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 AQP4P55087 323 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ZMYND11Q15326 602 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ODF4Q2M2E3 257 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 TMEM155Q4W5P6 130 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 FAM166AQ6J272 317 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 Q6ZSR3 168 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 DOK3Q7L591 496 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 WDR86Q86TI4 376 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 PRSS35Q8N3Z0 413 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 SPICQ8N5J4 248 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 OR5P3Q8WZ94 311 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 TFAP2CQ92754 450 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 RNF166Q96A37 237 aaPredicted RBP13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 UBAP1Q9NZ09 502 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 RNF7Q9UBF6 113 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ENPP5Q9UJA9 477 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 V9GYS6 101 aa13.69□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 B4DSR2 109 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 FAM157AC9JC47 383 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 TGFAP01135 160 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 HTR1AP08908 422 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 UBCP0CG48 685 aaKnown RBP13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 KIR3DL2P43630 455 aa13.68□□□□□ -0.22
MSH5-SAPCD1-206ENST00000491552 ZNF154Q13106 437 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms