RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 PMELP40967 661 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 GSK3AP49840 483 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 FAM3AP98173 230 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 DEGS2Q6QHC5 323 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 KCTD8Q6ZWB6 473 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 CPOQ8IVL8 374 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 HS3ST5Q8IZT8 346 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 SIGLECL1Q8N7X8 197 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 ASB17Q8WXJ9 295 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 DVL3Q92997 716 aaPredicted RBP13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 SGK3Q96BR1 496 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 UPRTQ96BW1 309 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 MNTQ99583 582 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 YIPF3Q9GZM5 350 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 DNAJB11Q9UBS4 358 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 ZNF69Q9UC07 566 aa13.83□□□□□ -0.2
PDLIM2-217ENST00000491330 ACOD1A6NK06 481 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 TMEM210A6NLX4 147 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 P2RY10O00398 339 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 GPR37O15354 613 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 CRYBA1P05813 215 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 CFPP27918 469 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 PSMB10P40306 273 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 OPRL1P41146 370 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 DAPP51397 102 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 PTGES3Q15185 160 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 FAM201AQ5SY85 155 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 THAP5Q7Z6K1 395 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 COMMD2Q86X83 199 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 CMTM4Q8IZR5 234 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 SGMS2Q8NHU3 365 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 RAB3IPQ96QF0 476 aaPredicted RBP13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 RBM4BQ9BQ04 359 aaKnown RBP13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 TVP23BQ9NYZ1 205 aa13.82□□□□□ -0.2
PDLIM2-217ENST00000491330 SLC22A31A6NKX4 558 aa13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 TMPRSS2O15393 492 aa13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 NDUFB3O43676 98 aa13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 ZNF254O75437 659 aa13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 TOX4O94842 621 aa13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 DCTDP32321 178 aa13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 MAP2K3P46734 347 aa13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 PDCD1Q15116 288 aa13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 ZNF829Q3KNS6 432 aaPredicted RBP13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 SLX4IPQ5VYV7 408 aa13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 GALNT4Q8N4A0 578 aa13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 LRRC29Q8WV35 223 aa13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 C12orf43Q96C57 262 aaKnown RBP13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 PCGF1Q9BSM1 259 aa13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 CAB39Q9Y376 341 aaPredicted RBP13.81□□□□□ -0.2
PDLIM2-217ENST00000491330 TRAV40A0A0B4J280 105 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 NKX6-3A6NJ46 265 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 ZAR1LA6NP61 321 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 ZNF879B4DU55 563 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 MTRF1O75570 445 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 ATP6V1B1P15313 513 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 SLC2A5P22732 501 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 PSMA6P60900 246 aaKnown RBP13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 FGF12P61328 243 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 APOFQ13790 326 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 LRRC10Q5BKY1 277 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 NXNL2Q5VZ03 156 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 LYPD2Q6UXB3 125 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 C9orf139Q6ZV77 190 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 GID4Q8IVV7 300 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 ZDHHC22Q8N966 263 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 C19orf18Q8NEA5 215 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 OR1M1Q8NGA1 313 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 GATAD2BQ8WXI9 593 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 MED30Q96HR3 178 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 FAM71F1Q96KD3 344 aaPredicted RBP13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 NOX4Q9NPH5 578 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 HAO2Q9NYQ3 351 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 KAAG1Q9UBP8 84 aa13.8□□□□□ -0.2
PDLIM2-217ENST00000491330 hCG_38984A0A1B0GV85 526 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 CLDN34H7C241 214 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 SELENOFO60613 162 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 CST4P01036 141 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 GYPAP02724 150 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 HKR1P10072 659 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 HNRNPA0Q13151 305 aaKnown RBP13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 TMED1Q13445 227 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 KLF17Q5JT82 389 aaPredicted RBP13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 TEX36Q5VZQ5 186 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 ZDHHC23Q8IYP9 409 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 GCSAMQ8N6F7 178 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 LRTOMTQ8WZ04 291 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 ST8SIA4Q92187 359 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 PIGCQ92535 297 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 RNF170Q96K19 258 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 DMRTB1Q96MA1 342 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 TEAD3Q99594 435 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 GABARAPL3Q9BY60 117 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 IKZF2Q9UKS7 526 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 ORC6Q9Y5N6 252 aa13.79□□□□□ -0.2
PDLIM2-217ENST00000491330 ANK3Q12955 4377 aaKnown RBP13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 ZNF816-ZNF321PA0A0X1KG74 233 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 TMEM269A0A1B0GVZ9 245 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 DNAJC9-AS1A6NH13 148 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 DVL1O14640 695 aa13.78□□□□□ -0.2
PDLIM2-217ENST00000491330 CDIPTO14735 213 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms