RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 LANCL1O43813 399 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 ALX3O95076 343 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 TTRP02766 147 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 IKZF1Q13422 519 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 C1orf100Q5SVJ3 147 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 FAM27BQ5VT28 67 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 ZNF573Q86YE8 665 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 SPAG16Q8N0X2 631 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 GALNT16Q8N428 558 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 RPS4Y2Q8TD47 263 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 AMELYQ99218 206 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 SOSTQ9BQB4 213 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 RIMS4Q9H426 269 aaPredicted RBP6.5□□□□□ -1.37
NPHP3-208ENST00000490993 GLRX2Q9NS18 164 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 CHCHD2Q9Y6H1 151 aaPredicted RBP6.5□□□□□ -1.37
NPHP3-208ENST00000490993 R4GN57 208 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 C2orf16Q68DN1 1984 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 A0A0G2JK05 382 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 C5orf49A4QMS7 147 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 OR5H15A6NDH6 313 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 ZNF32P17041 273 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 NPY4RP50391 375 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 SPEM2Q0P670 501 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 POU4F3Q15319 338 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 ZDHHC23Q8IYP9 409 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 OSR2Q8N2R0 312 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 GALNT11Q8NCW6 608 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 OR2M7Q8NG81 312 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 GPX8Q8TED1 209 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 SCARB1Q8WTV0 552 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 MAP6Q96JE9 813 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 SPACA5Q96QH8 159 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 KCNS2Q9ULS6 477 aa6.5□□□□□ -1.37
NPHP3-208ENST00000490993 MUC22E2RYF6 1773 aaPredicted RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 TRAV17A0A0B4J275 112 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 SHISA3A0PJX4 238 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 NTN3O00634 580 aaPredicted RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 CDK2AP1O14519 115 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 ONECUT2O95948 504 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 IGHV3-9P01782 118 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 SULT1A3P0DMM9 295 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 SULT1A4P0DMN0 295 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 RAC2P15153 192 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 AVPR2P30518 371 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 ARF1P84077 181 aaKnown RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 ZFP36L1Q07352 338 aaKnown RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 CD300CQ08708 224 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 DCAF10Q5QP82 559 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 AKR7LQ8NHP1 331 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 MRPS24Q96EL2 167 aaKnown RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 IMMP1LQ96LU5 166 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 OCSTAMPQ9BR26 566 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 C12orf49Q9H741 205 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 PRDM6Q9NQX0 595 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 TMEM38BQ9NVV0 291 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 ZSCAN5BA6NJL1 495 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 ZNF44P15621 663 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 SELENOPP49908 381 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 DBPQ10586 325 aaPredicted RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 ESCO2Q56NI9 601 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 FAM76BQ5HYJ3 339 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 OR2A2Q6IF42 318 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 ZNF774Q6NX45 483 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 TFAP2EQ6VUC0 442 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 C20orf196Q8IYI0 205 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 TCEAL3Q969E4 200 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 PRRX2Q99811 253 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 NUDT16L1Q9BRJ7 211 aaKnown RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 OBP2BQ9NPH6 170 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 DLL4Q9NR61 685 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 ZNF175Q9Y473 711 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 KIAA1549LQ6ZVL6 1849 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 SDK1Q7Z5N4 2213 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 A0A0J9YW62 118 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 TRAF3IP2O43734 574 aaPredicted RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 IL32P24001 234 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 FPR2P25090 351 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 AGFG1P52594 562 aaKnown RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 CASP6P55212 293 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 SPINK14Q6IE38 97 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 OR10K1Q8NGX5 313 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 SLC25A38Q96DW6 304 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 LRRC46Q96FV0 321 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 ZNF845Q96IR2 970 aaPredicted RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 ZNF649Q9BS31 505 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 RSPO3Q9BXY4 272 aaPredicted RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 TINAGL1Q9GZM7 467 aaPredicted RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 CCDC86Q9H6F5 360 aaKnown RBP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 TREM1Q9NP99 234 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 G6PC2Q9NQR9 355 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 FAM206AQ9NX38 181 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 PLA2G3Q9NZ20 509 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 POLDIP2Q9Y2S7 368 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 KNL1Q8NG31 2342 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 hCG_1807616A0A1W2PRN6 198 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 RNF212BA8MTL3 300 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 PRSS44E7EML9 344 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 SIX6O95475 246 aa6.49□□□□□ -1.37
NPHP3-208ENST00000490993 RPS11P62280 158 aaKnown RBP eCLIP6.49□□□□□ -1.37
NPHP3-208ENST00000490993 BLOC1S1P78537 153 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms