RNA–Protein interactions for RNA: ENST00000490516.5

EXOSC3-207, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 773 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-207ENST00000490516 C11orf65Q8NCR3 313 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 TMEM185AQ8NFB2 350 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 OR13C2Q8NGS9 318 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 OR5K1Q8NHB7 308 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 ZNF570Q96NI8 536 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 ATF6BQ99941 703 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 NUAK2Q9H093 628 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 PPP1R3EQ9H7J1 279 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 SCOCQ9UIL1 159 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 SH3GLB1Q9Y371 365 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 GMEB1Q9Y692 573 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 SORL1Q92673 2214 aa10.86□□□□□ -0.67
EXOSC3-207ENST00000490516 TRPC5OSA6NMA1 111 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 EVPLLA8MZ36 301 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 BIRC5O15392 142 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 AHCYL1O43865 530 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 OR5F1O95221 314 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 LY86O95711 162 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 FRMD6-AS1P0C7T7 363 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 KITP10721 976 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 CCL3L1P16619 93 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 GABRA2P47869 451 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 SLC9A3P48764 834 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 DYNLT3P51808 116 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 SLC25A1P53007 311 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 WDR4P57081 412 aaKnown RBP10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 STX3Q13277 289 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 C9orf66Q5T8R8 295 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 FAM122BQ7Z309 247 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 OAFQ86UD1 273 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 ZNF329Q86UD4 541 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 OSR2Q8N2R0 312 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 KLHL30-AS1Q8NEE0 82 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 MNS1Q8NEH6 495 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 SLC26A7Q8TE54 656 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 TSSK2Q96PF2 358 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 LGALS13Q9UHV8 139 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 CORO2BQ9UQ03 480 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 TBL2Q9Y4P3 447 aaKnown RBP10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 HILPDAQ9Y5L2 63 aa10.85□□□□□ -0.67
EXOSC3-207ENST00000490516 PLECQ15149 4684 aaKnown RBP10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 ODF3BA8MYP8 253 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 M0R135 149 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 UBDO15205 165 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 CD14P08571 375 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 AZGP1P25311 298 aaKnown RBP10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 MDH1P40925 334 aaKnown RBP10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 CRYBA2P53672 197 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 GP2P55259 537 aaKnown RBP10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 TPTEP56180 551 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 KRR1Q13601 381 aaKnown RBP10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 SELPLGQ14242 412 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 RFX4Q33E94 735 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 TMEM200BQ69YZ2 307 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 SLC18B1Q6NT16 456 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 BCAS4Q8TDM0 211 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 ZNF799Q96GE5 643 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 RAX2Q96IS3 184 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 OR52B2Q96RD2 323 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 PNRC2Q9NPJ4 139 aaKnown RBP10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 VNN3Q9NY84 501 aa10.84□□□□□ -0.67
EXOSC3-207ENST00000490516 IGKV1D-17A0A075B6S4 117 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 PSMB11A5LHX3 300 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 OR2AT4A6NND4 320 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 FAM90A22PA8MWA6 464 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 EFCAB9A8MZ26 197 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 DCTN6O00399 190 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 AKR7A2O43488 359 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 CD24P25063 80 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 SLC34A1Q06495 639 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 CYP51A1Q16850 503 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 PTCHD4Q6ZW05 846 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 PATL1Q86TB9 770 aaKnown RBP10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 FUNDC1Q8IVP5 155 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 DDB2Q92466 427 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 TLNRD1Q9H1K6 362 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 NMNAT1Q9HAN9 279 aaPredicted RBP10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 NLKQ9UBE8 527 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 ALMS1Q8TCU4 4167 aa10.83□□□□□ -0.68
EXOSC3-207ENST00000490516 ANKRD30BLA7E2S9 258 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 SEC14L6B5MCN3 397 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 CCL24O00175 119 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 SOCS2O14508 198 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 OR1E2P47887 323 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 VEGFCP49767 419 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 ENTPD1P49961 510 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 CAPZA1P52907 286 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 OR12D2P58182 307 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 RPL31P62899 125 aaKnown RBP10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 SPIBQ01892 262 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 C9orf152Q5JTZ5 239 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 NRMQ8IXM6 262 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 SLC26A10Q8NG04 563 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 OR4M1Q8NGD0 313 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 RPL3LQ92901 407 aaKnown RBP10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 POLR2J2Q9GZM3 115 aaKnown RBP10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 POLR2J3Q9H1A7 115 aaKnown RBP10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 USE1Q9NZ43 259 aa10.82□□□□□ -0.68
EXOSC3-207ENST00000490516 N6AMT1Q9Y5N5 214 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms