RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 ZNF121P58317 390 aaPredicted RBP7.99□□□□□ -1.13
LSAMP-205ENST00000490035 VMA21Q3ZAQ7 101 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 C9orf135Q5VTT2 229 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 RGS7BPQ6MZT1 257 aaPredicted RBP7.99□□□□□ -1.13
LSAMP-205ENST00000490035 WDR73Q6P4I2 378 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 AMIGO3Q86WK7 504 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 SUMF1Q8NBK3 374 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 PPP1R1CQ8WVI7 109 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 BANF2Q9H503 90 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 ATP23Q9Y6H3 246 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 SH2D7A6NKC9 451 aaPredicted RBP7.99□□□□□ -1.13
LSAMP-205ENST00000490035 FUCA1P04066 466 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 PAX6P26367 422 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 SURF2Q15527 256 aaPredicted RBP7.99□□□□□ -1.13
LSAMP-205ENST00000490035 TOR2AQ5JU69 321 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 C12orf73Q69YU5 71 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 GLDNQ6ZMI3 551 aaPredicted RBP7.99□□□□□ -1.13
LSAMP-205ENST00000490035 C17orf107Q6ZR85 190 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 OR51H1Q8NH63 302 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 PLA2G12AQ9BZM1 189 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 SRRQ9GZT4 340 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 MYOZ1Q9NP98 299 aaPredicted RBP7.99□□□□□ -1.13
LSAMP-205ENST00000490035 FBXO4Q9UKT5 387 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 A4GNTQ9UNA3 340 aa7.99□□□□□ -1.13
LSAMP-205ENST00000490035 NCBP2LA6PVI3 153 aaKnown RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 COX7A2P2O60397 106 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 ICOSLGO75144 302 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 TMEM211Q6ICI0 200 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 CCDC190Q86UF4 302 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 TDHQ8IZJ6 230 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 HMGCLL1Q8TB92 370 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 RPUSD4Q96CM3 377 aaKnown RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 OR8B4Q96RC9 309 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 SEBOXQ9HB31 216 aaPredicted RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 GPR173Q9NS66 373 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 CXXC1Q9P0U4 656 aaPredicted RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 TAAR3PQ9P1P4 343 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 ADAMTS7Q9UKP4 1686 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 A0A1W2PN81 502 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 SLC22A20A6NK97 555 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 OR5B21A6NL26 309 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 FGF17O60258 216 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 DHRS3O75911 302 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 CHRNA7P36544 502 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 IL13RA2Q14627 380 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 FAM74A3Q4VXF1 159 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 RTN4IP1Q8WWV3 396 aaPredicted RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 ST8SIA2Q92186 375 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 KISS1RQ969F8 398 aaPredicted RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 SAT2Q96F10 170 aaPredicted RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 ZMAT3Q9HA38 289 aaKnown RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 NTN4Q9HB63 628 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 PPP1R3CQ9UQK1 317 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 TMEM202A6NGA9 273 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 MBPP02686 304 aaPredicted RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 PTGER1P34995 402 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 AGFG1P52594 562 aaKnown RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 LINC00596Q86U02 117 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 SLC24A4Q8NFF2 622 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 OR52N4Q8NGI2 321 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 OR1F12Q8NHA8 337 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 LSM2Q9Y333 95 aaKnown RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 TP53BP1Q12888 1972 aaPredicted RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 CCDC187A0A096LP49 1063 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 OR13C7P0DN81 318 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 TEX261Q6UWH6 196 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 TAAR9Q96RI9 348 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 U3KQ87 197 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 OPN1LWP04000 364 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 EMP3P54852 163 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 GTF2H5Q6ZYL4 71 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 C12orf49Q9H741 205 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 B4DEV8 164 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 NKX2-2O95096 273 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 NME1P15531 152 aaKnown RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 CD81P60033 236 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 ZNF574Q6ZN55 896 aaPredicted RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 SH2D5Q6ZV89 423 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 PRSS45Q7RTY3 260 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 MANBALQ9NQG1 85 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 TIMM9Q9Y5J7 89 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 TMPRSS11DO60235 418 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 WDR1O75083 606 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 TRILQ7L0X0 811 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 CLRN3Q8NCR9 226 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.98□□□□□ -1.13
LSAMP-205ENST00000490035 SLCO1C1Q9NYB5 712 aa7.98□□□□□ -1.13
LSAMP-205ENST00000490035 DHHO43323 396 aa7.97□□□□□ -1.13
LSAMP-205ENST00000490035 CD80P33681 288 aa7.97□□□□□ -1.13
LSAMP-205ENST00000490035 GPNMBQ14956 572 aa7.97□□□□□ -1.13
LSAMP-205ENST00000490035 Q7L0L9 218 aa7.97□□□□□ -1.13
LSAMP-205ENST00000490035 OR1L4Q8NGR5 311 aa7.97□□□□□ -1.13
LSAMP-205ENST00000490035 SLC22A13Q9Y226 551 aa7.97□□□□□ -1.13
LSAMP-205ENST00000490035 TRAV17A0A0B4J275 112 aa7.97□□□□□ -1.13
LSAMP-205ENST00000490035 PRICKLE3O43900 615 aaPredicted RBP7.97□□□□□ -1.13
LSAMP-205ENST00000490035 DUS4LO95620 317 aaKnown RBP7.97□□□□□ -1.13
LSAMP-205ENST00000490035 HMGA2P52926 109 aa7.97□□□□□ -1.13
LSAMP-205ENST00000490035 ELLP55199 621 aaPredicted RBP7.97□□□□□ -1.13
LSAMP-205ENST00000490035 LBHQ53QV2 105 aaPredicted RBP7.97□□□□□ -1.13
LSAMP-205ENST00000490035 MRGPRX3Q96LB0 322 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 996.9 ms