RNA–Protein interactions for RNA: ENST00000489979.1

VARS-227, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 658 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-227ENST00000489979 NOS3P29474 1203 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 PYCR1P32322 319 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 DDOSTP39656 456 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 NAA10P41227 235 aaPredicted RBP11.36□□□□□ -0.59
VARS-227ENST00000489979 EMX1Q04741 257 aaPredicted RBP11.36□□□□□ -0.59
VARS-227ENST00000489979 ATPAF1Q5TC12 328 aaPredicted RBP11.36□□□□□ -0.59
VARS-227ENST00000489979 FOXB2Q5VYV0 432 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 HCP5Q6MZN7 132 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 C11orf87Q6NUJ2 197 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 SLC15A3Q8IY34 581 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 OR52J3Q8NH60 311 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 R3HDM4Q96D70 268 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 AJUBAQ96IF1 538 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 IFT27Q9BW83 186 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 NPFFR1Q9GZQ6 430 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 PPP1R3EQ9H7J1 279 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 SAR1AQ9NR31 198 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 NDUFAF4Q9P032 175 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 ZNF391Q9UJN7 358 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 AP3M1Q9Y2T2 418 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 SF3B6Q9Y3B4 125 aaKnown RBP11.36□□□□□ -0.59
VARS-227ENST00000489979 CAPN7Q9Y6W3 813 aa11.36□□□□□ -0.59
VARS-227ENST00000489979 A0A1W2PQ09 198 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 MEGF11A6BM72 1044 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 TVP23AA6NH52 213 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 NKX6-3A6NJ46 265 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 CDIPTO14735 213 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 XRCC2O43543 280 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 CHST1O43916 411 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 DIRAS1O95057 198 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 NDUFB7P17568 137 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 RHCEP18577 417 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 POU1F1P28069 291 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 BLMHQ13867 455 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 TAF13Q15543 124 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 DGUOKQ16854 277 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 ZBTB37Q5TC79 503 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 DCXRQ7Z4W1 244 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 NDUFA11Q86Y39 141 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 ZDHHC21Q8IVQ6 265 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 OR4F17Q8NGA8 305 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 OR4C15Q8NGM1 316 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 FAM162AQ96A26 154 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 SPSB4Q96A44 273 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 RCN3Q96D15 328 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 DUS3LQ96G46 650 aaKnown RBP11.35□□□□□ -0.59
VARS-227ENST00000489979 GAFA1Q96PS6 74 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 OR4F4Q96R69 305 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 KCNJ15Q99712 375 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 NKX3-1Q99801 234 aaPredicted RBP11.35□□□□□ -0.59
VARS-227ENST00000489979 MEGF9Q9H1U4 602 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 WDR13Q9H1Z4 485 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 CENPMQ9NSP4 180 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 MRGBPQ9NV56 204 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 HAO2Q9NYQ3 351 aa11.35□□□□□ -0.59
VARS-227ENST00000489979 SLC25A10Q9UBX3 287 aaPredicted RBP11.35□□□□□ -0.59
VARS-227ENST00000489979 TBX1O43435 398 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 ANGPTL7O43827 346 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 TIPRLO75663 272 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 NCK1P16333 377 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 FAM3AP98173 230 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.34□□□□□ -0.59
VARS-227ENST00000489979 SF3A3Q12874 501 aaKnown RBP eCLIP11.34□□□□□ -0.592e-7■■■■■ 27.2
VARS-227ENST00000489979 HABP2Q14520 560 aaPredicted RBP11.34□□□□□ -0.59
VARS-227ENST00000489979 SLC35F1Q5T1Q4 408 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 LYPD4Q6UWN0 246 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 ZNF788Q6ZQV5 615 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 SLC16A9Q7RTY1 509 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 ARPINQ7Z6K5 226 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 PROKR2Q8NFJ6 384 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 ZNRF4Q8WWF5 429 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 RAB3IPQ96QF0 476 aaPredicted RBP11.34□□□□□ -0.59
VARS-227ENST00000489979 FUZQ9BT04 418 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 DNTTIP1Q9H147 329 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 TLNRD1Q9H1K6 362 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 ZNF702PQ9H963 129 aa11.34□□□□□ -0.59
VARS-227ENST00000489979 ADARB2-AS1A8MUL3 147 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 H0YAE9 185 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 NME4O00746 187 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 IDH3BO43837 385 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 GSK3BP49841 420 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 BMXP51813 675 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 SLC7A2P52569 658 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 AANATQ16613 207 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 TIGD6Q17RP2 521 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 DTX3Q8N9I9 347 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 CYB561A3Q8NBI2 242 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 OR51L1Q8NGJ5 315 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 OR5D13Q8NGL4 314 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 ANGPTL6Q8NI99 470 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 PIFOQ8TCI5 191 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 RPL3LQ92901 407 aaKnown RBP11.33□□□□□ -0.6
VARS-227ENST00000489979 SGK3Q96BR1 496 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 SLAMF6Q96DU3 332 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 MED30Q96HR3 178 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 REEP6Q96HR9 211 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 C7orf34Q96L11 122 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 DHRS1Q96LJ7 313 aa11.33□□□□□ -0.6
VARS-227ENST00000489979 CITED2Q99967 270 aaPredicted RBP11.33□□□□□ -0.6
VARS-227ENST00000489979 ELL3Q9HB65 397 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms