RNA–Protein interactions for RNA: ENST00000489862.1

DEPDC1-204, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best)

Gene DEPDC1, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-204ENST00000489862 C9orf40Q8IXQ3 194 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 HS3ST5Q8IZT8 346 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 PGAM4Q8N0Y7 254 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 ATPAF2Q8N5M1 289 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 FLVCR1-AS1Q8TAF5 88 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 ACTL9Q8TC94 416 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 IL1F10Q8WWZ1 152 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 TMEM190Q8WZ59 177 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 PACRGQ96M98 296 aaPredicted RBP2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 TSG101Q99816 390 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 C20orf144Q9BQM9 153 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 OR51B6Q9H340 312 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 ZNF385DQ9H6B1 395 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 UGT1A7Q9HAW7 530 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 UGT1A8Q9HAW9 530 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 ELL3Q9HB65 397 aaPredicted RBP2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 VCX3AQ9NNX9 186 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 TIGARQ9NQ88 270 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 SAR1BQ9Y6B6 198 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 CHD9Q3L8U1 2897 aa2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 PHF3Q92576 2039 aaKnown RBP2.47□□□□□ -2.01
DEPDC1-204ENST00000489862 KIR2DS1A0A191URI9 304 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 ANKRD20A5PA0PJZ0 165 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 A6NIZ1 184 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 ZNF726A6NNF4 738 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 FAM166BA8MTA8 275 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 E9PLD3 99 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 F5H5T6 163 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 SAP18O00422 153 aaKnown RBP2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 HAT1O14929 419 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 NUPL2O15504 423 aaKnown RBP2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 FKBP6O75344 327 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 CRLF1O75462 422 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 AQP8O94778 261 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 UTS2O95399 124 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 SLC2A10O95528 541 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 DUS4LO95620 317 aaKnown RBP2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 GCGP01275 180 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 IFNA6P05013 189 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 CTSLP07711 333 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 PGA4P0DJD7 388 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 PGA3P0DJD8 388 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 PGA5P0DJD9 388 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 HSD17B1P14061 328 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 LOXP28300 417 aaPredicted RBP2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 GTF2H1P32780 548 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 GALR1P47211 349 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 RPL29P47914 159 aaKnown RBP2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 RAP1BP61224 184 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 REG3AQ06141 175 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 UNC119Q13432 240 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 KIR2DS1Q14954 304 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 ZNF146Q15072 292 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 PGGHGQ32M88 737 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 PRSS41Q7RTY9 318 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 THOC6Q86W42 341 aaKnown RBP2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 WDFY1Q8IWB7 410 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 NECAP1Q8NC96 275 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 OR6K2Q8NGY2 324 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 RORBQ92753 470 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 TMEM54Q969K7 222 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 PGLYRP4Q96LB8 373 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 CIB1Q99828 191 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 BCL2L14Q9BZR8 327 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 SLC19A3Q9BZV2 496 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 NMUR2Q9GZQ4 415 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 TOLLIPQ9H0E2 274 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 OR51J1Q9H342 316 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 KCNJ16Q9NPI9 418 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 ASCL3Q9NQ33 180 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 TMEM9BQ9NQ34 198 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 EXOSC3Q9NQT5 275 aaKnown RBP2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 TAS2R9Q9NYW1 312 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 SMAD5-AS1Q9Y6J3 95 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 A0A0C4DFX4 3053 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 LAMA4Q16363 1823 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 REV3LO60673 3130 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 CHD7Q9P2D1 2997 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 SEC14L6B5MCN3 397 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 DFFAO00273 331 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 CDIPTO14735 213 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 SOX15O60248 233 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 VENTXO95231 258 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 PSMG1O95456 288 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 NSA2O95478 260 aaKnown RBP2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 HLA-DRAP01903 254 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 ARG1P05089 322 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 USF1P22415 310 aaPredicted RBP2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 GRPRP30550 384 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 GLP1RP43220 463 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 CAPZBP47756 277 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 TGM4P49221 684 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 GDI2P50395 445 aaKnown RBP2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 FABP6P51161 128 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 HNRNPA3P51991 378 aaKnown RBP2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 OR2B8PP59922 312 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 ERVS71-1P61550 626 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 RHOAP61586 193 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 BCL2L1Q07817 233 aa2.46□□□□□ -2.02
DEPDC1-204ENST00000489862 CAPRIN1Q14444 709 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms