RNA–Protein interactions for RNA: ENST00000489853.1

SNRNP40-206, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 1,928 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-206ENST00000489853 XKRYO14609 159 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 GEMIN2O14893 280 aaKnown RBP4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 NUDT21O43809 227 aaKnown RBP4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 TNFSF13O75888 250 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 SCGNO76038 276 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 AHSA1O95433 338 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 TBX18O95935 607 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 SCGB1D1O95968 90 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 CD160O95971 181 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 PRH1P02810 166 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 OPN1MWP04001 364 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 PCCBP05166 539 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 GYPBP06028 91 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 RHOCP08134 193 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 MMP7P09237 267 aaPredicted RBP4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 GIMD1P0DJR0 217 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 OPN1MW2P0DN77 364 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 OPN1MW3P0DN78 364 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 IMPA1P29218 277 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 CHRNB4P30926 498 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 GDI1P31150 447 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC6A6P31641 620 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 OR3A2P47893 321 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 SOX2P48431 317 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC25A1P53007 311 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM33P57088 247 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 HLA-DRB3P79483 266 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 UBE2V1Q13404 147 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 SHHQ15465 462 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 C10orf120Q5SQS8 335 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 FAM166AQ6J272 317 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 RSPO2Q6UXX9 243 aaPredicted RBP4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 FBXW12Q6X9E4 464 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF627Q7L945 461 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 HMGN2P46Q86SG4 172 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 HOGA1Q86XE5 327 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF679Q8IYX0 411 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 SHISA5Q8N114 240 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 GBGT1Q8N5D6 347 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 APCDD1LQ8NCL9 501 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 ZBTB34Q8NCN2 500 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 OR8G5Q8NG78 346 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 OR10G4Q8NGN3 311 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 PPTC7Q8NI37 304 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 RNF128Q8TEB7 428 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 TMEM239Q8WW34 195 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 HAS2Q92819 552 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 TSLPQ969D9 159 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 MCHR2Q969V1 340 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 MRGPRFQ96AM1 343 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 CAPNS2Q96L46 248 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 ADAD1Q96M93 576 aaKnown RBP4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 SCGB3A2Q96PL1 93 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 LMF1Q96S06 567 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 SLC22A12Q96S37 553 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 RARRES2Q99969 163 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 ZFYVE21Q9BQ24 234 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 FAM83CQ9BQN1 747 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 PRSS27Q9BQR3 290 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 PARD6GQ9BYG4 376 aaPredicted RBP4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 TTTY10Q9BZA0 68 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 WWTR1Q9GZV5 400 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 CSTL1Q9H114 145 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 PRSS16Q9NQE7 514 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 ZCCHC3Q9NUD5 404 aaKnown RBP4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 CLDND1Q9NY35 253 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 FOXJ2Q9P0K8 574 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 B3GAT1Q9P2W7 334 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 FBXL17Q9UF56 701 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 NAGKQ9UJ70 344 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 RAB22AQ9UL26 194 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 SRPK3Q9UPE1 567 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 ZFP37Q9Y6Q3 630 aaPredicted RBP4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 COLEC10Q9Y6Z7 277 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 DOCK6Q96HP0 2047 aa4.24□□□□□ -1.73
SNRNP40-206ENST00000489853 TRAV8-7A0A075B6U6 113 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 A0A087WV62 115 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TRAV39A0A0B4J263 110 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 A0A0G2JN53 185 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 SMIM35A0A1B0GVV1 85 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 CBY3A6NI87 242 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 A8MVM7 634 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 LEFTY2O00292 366 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 FCMRO60667 390 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 AGR2O95994 175 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 CYB5R3P00387 301 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 PNPP00491 289 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 LCATP04180 440 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 HSPB1P04792 205 aaKnown RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 IFNA6P05013 189 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 CSN2P05814 226 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 TDGF1P13385 188 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 F3P13726 295 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 FOSL2P15408 326 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 ZNF708P17019 499 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 AMY2BP19961 511 aa4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 APOBEC3AP31941 199 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 CEACAM8P31997 349 aaPredicted RBP4.23□□□□□ -1.73
SNRNP40-206ENST00000489853 BSGP35613 385 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms