RNA–Protein interactions for RNA: ENST00000489741.1

PRPF40A-210, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 3

Gene PRPF40A, Length 776 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-210ENST00000489741 SLC16A7O60669 478 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 KHDRBS3O75525 346 aaKnown RBP5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 NDUFB2O95178 105 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 CYB5R3P00387 301 aaPredicted RBP5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 MDKP21741 143 aaPredicted RBP5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 PEX2P28328 305 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 IFNA8P32881 189 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 PSMB10P40306 273 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 GPR4P46093 362 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 MTNR1AP48039 350 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 SRP9P49458 86 aaKnown RBP5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 RAD23AP54725 363 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 BPIFB3P59826 476 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 COX10Q12887 443 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 MAB21L1Q13394 359 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 KRR1Q13601 381 aaKnown RBP5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 MAPRE2Q15555 327 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 GFOD2Q3B7J2 385 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 IFI44LQ53G44 452 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 FAM201AQ5SY85 155 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 OTPQ5XKR4 325 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 GPR139Q6DWJ6 353 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 ZNF730Q6ZMV8 503 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 DPY19L2P2Q6ZN68 376 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 PTCHD4Q6ZW05 846 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 BCDIN3DQ7Z5W3 292 aaKnown RBP5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 OR5AS1Q8N127 324 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 PARP8Q8N3A8 854 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 ATG16L2Q8NAA4 619 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 OR5L1Q8NGL2 311 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 ZNF420Q8TAQ5 688 aaPredicted RBP5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 ERGIC1Q969X5 290 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 APOBEC3DQ96AK3 386 aaPredicted RBP5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 TMIGD2Q96BF3 282 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 C7orf34Q96L11 122 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 ZNF582Q96NG8 517 aaPredicted RBP5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 COQ7Q99807 217 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 NUAK2Q9H093 628 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 SYT4Q9H2B2 425 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 OR5V1Q9UGF6 321 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 LHFPL6Q9Y693 200 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 ENPP4Q9Y6X5 453 aa5.27□□□□□ -1.57
PRPF40A-210ENST00000489741 IGHV3OR16-10A0A075B7F0 116 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 A0A1B0GUS0 222 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 MDFIC2A0A1B0GVS7 189 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 SRRM5B3KS81 715 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 F5H5P2 479 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 CXCR6O00574 342 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 NME4O00746 187 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 PHYHO14832 338 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 FCN3O75636 299 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 PPP1R3DO95685 299 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 PTBP3O95758 552 aaKnown RBP5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 ACSM4P0C7M7 580 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 MMP9P14780 707 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 CRABP1P29762 137 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 RPL4P36578 427 aaKnown RBP5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 CD200P41217 278 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 DEFA6Q01524 100 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 LIPEQ05469 1076 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 SEC23BQ15437 767 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 DEFB112Q30KQ8 113 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 CLEC12AQ5QGZ9 265 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 WDR25Q64LD2 544 aaPredicted RBP5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 C1orf94Q6P1W5 598 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 LYPD2Q6UXB3 125 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 BTNL3Q6UXE8 466 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 ARPINQ7Z6K5 226 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 ADCK1Q86TW2 530 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 NAA40Q86UY6 237 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 MOGAT3Q86VF5 341 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 OR6V1Q8N148 313 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 TMEM86BQ8N661 226 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 GJC3Q8NFK1 279 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 OR10AD1Q8NGE0 317 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 OR10S1Q8NGN2 331 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 RCN3Q96D15 328 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 PLEKHA8Q96JA3 519 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 ZNF570Q96NI8 536 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 TSSK2Q96PF2 358 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 HOPXQ9BPY8 73 aaPredicted RBP5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 NUDT16L1Q9BRJ7 211 aaKnown RBP5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 PRSS22Q9GZN4 317 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 HDHD2Q9H0R4 259 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 NOX4Q9NPH5 578 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 PNRC2Q9NPJ4 139 aaKnown RBP5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 TMEM100Q9NV29 134 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 PTTG3PQ9NZH4 202 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 NDUFAF4Q9P032 175 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 B9D1Q9UPM9 204 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 TMEM5Q9Y2B1 443 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 IER3IP1Q9Y5U9 82 aa5.26□□□□□ -1.57
PRPF40A-210ENST00000489741 SOCS2O14508 198 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 ARPC3O15145 178 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 INMTO95050 263 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 NDUFA7O95182 113 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 SERPINA1P01009 418 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 HLA-DPB1P04440 258 aa5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 H1F0P07305 194 aaKnown RBP5.25□□□□□ -1.57
PRPF40A-210ENST00000489741 TROVE2P10155 538 aaKnown RBP eCLIP5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms