RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 HABP2Q14520 560 aaPredicted RBP6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 TSTQ16762 297 aaKnown RBP6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 NKPD1Q17RQ9 610 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 TMEM176BQ3YBM2 270 aaPredicted RBP6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 ARSJQ5FYB0 599 aaPredicted RBP6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 NXNL2Q5VZ03 156 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 WBP2NLQ6ICG8 309 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 SMARCD3Q6STE5 483 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 NPSR1Q6W5P4 371 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 OAFQ86UD1 273 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 NANOGP1Q8N7R0 232 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 SYT8Q8NBV8 401 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 SCCPDHQ8NBX0 429 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 OR52I1Q8NGK6 324 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 OR8D4Q8NGM9 314 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 MCFD2Q8NI22 146 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 PHOSPHO1Q8TCT1 267 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 DYNC2LI1Q8TCX1 351 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 OTULINQ96BN8 352 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 MRPL48Q96GC5 212 aaKnown RBP6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 SAMD8Q96LT4 415 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 NUDT16L1Q9BRJ7 211 aaKnown RBP6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 CHCHD6Q9BRQ6 235 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 IFT27Q9BW83 186 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 SLC19A3Q9BZV2 496 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 OR52D1Q9H346 318 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 POFUT1Q9H488 388 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 FGF20Q9NP95 211 aaPredicted RBP6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 EXOSC4Q9NPD3 245 aaKnown RBP6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 ISYNA1Q9NPH2 558 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 EXOSC3Q9NQT5 275 aaKnown RBP6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 DECR2Q9NUI1 292 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 MRPS18AQ9NVS2 196 aaKnown RBP6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 UPB1Q9UBR1 384 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 KCNE5Q9UJ90 142 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 FZR1Q9UM11 496 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 SSR3Q9UNL2 185 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 A3GALT2U3KPV4 340 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 LRP2P98164 4655 aa6.06□□□□□ -1.44
EXOSC3-206ENST00000489414 PNMA8CA0A1B0GUJ8 204 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 PRSS29PA6NIE9 313 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 NPIPB9F8W1W9 429 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 FAM229AH3BQW9 127 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 M0R082 166 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 ZNF264O43296 627 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 UTS2O95399 124 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 CH25HO95992 272 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 IGF2P01344 180 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 IGKV1D-16P01601 117 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 FBP1P09467 338 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 HTR1FP30939 366 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 ACAA2P42765 397 aaKnown RBP6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 CAPZA2P47755 286 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 MTNR1BP49286 362 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 ENTPD1P49961 510 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 MMP15P51511 669 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 LUMP51884 338 aaPredicted RBP6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 WNT4P56705 351 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 UBE2NP61088 152 aaKnown RBP6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 RPS7P62081 194 aaKnown RBP6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 NCS1P62166 190 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 TNP2Q05952 138 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 MFGE8Q08431 387 aaPredicted RBP6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 AQP6Q13520 282 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 KLHL26Q53HC5 615 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 TSPO2Q5TGU0 170 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 LCN1P1Q5VSP4 162 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 TMEM65Q6PI78 240 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 TMPRSS11AQ6ZMR5 421 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 ZAR1Q86SH2 424 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 Q8N2B8 174 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 LNX2Q8N448 690 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 DTX3Q8N9I9 347 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 OR4N2Q8NGD1 307 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 PFN4Q8NHR9 129 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 NDNFQ8TB73 568 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 UFD1Q92890 307 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 SGTBQ96EQ0 304 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 PRSS27Q9BQR3 290 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 SPATA25Q9BR10 227 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 DCTN5Q9BTE1 182 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 TBL1XR1Q9BZK7 514 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 LAT2Q9GZY6 243 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 ZNF702PQ9H963 129 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 HHATLQ9HCP6 504 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 CMC2Q9NRP2 79 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 CCDC59Q9P031 241 aaKnown RBP6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 PLA2G2DQ9UNK4 145 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 GSTK1Q9Y2Q3 226 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 FAM96BQ9Y3D0 163 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 MAB21L2Q9Y586 359 aa6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 TSSC4Q9Y5U2 329 aaPredicted RBP6.05□□□□□ -1.44
EXOSC3-206ENST00000489414 VPS13BQ7Z7G8 4022 aa6.04□□□□□ -1.44
EXOSC3-206ENST00000489414 A0A087WUJ7 227 aa6.04□□□□□ -1.44
EXOSC3-206ENST00000489414 A0A1W2PNR3 127 aa6.04□□□□□ -1.44
EXOSC3-206ENST00000489414 A0A1W2PQD3 144 aa6.04□□□□□ -1.44
EXOSC3-206ENST00000489414 CDC42EP2O14613 210 aa6.04□□□□□ -1.44
EXOSC3-206ENST00000489414 AKAP8O43823 692 aaKnown RBP6.04□□□□□ -1.44
EXOSC3-206ENST00000489414 IDH3BO43837 385 aa6.04□□□□□ -1.44
EXOSC3-206ENST00000489414 NDUFB2O95178 105 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms